Command Claude Code
Review a Foundry pattern (or research / Mold) note for clarity and correctness against the corpus and tool source.
2 2d ago A 23 tokens
test-drive
26Command Claude Code
Drive an emulated end-to-end test of one or more Molds against a real fixture, evaluate against eval.md, and capture refinements.
2 2d ago A 29 tokens
test-mold
27Command Claude Code
Test-drive a single Mold against a scenarios.md case — run its cast, evaluate the output against eval.md properties.
2 2d ago A 23 tokens
Command Claude Code
Test-drive a whole pipeline against a scenarios.md journey — run the Mold chain, evaluate between each step and end to end.
2 2d ago A 25 tokens
Instructions file CodexOpenCode
AGENTS.md instructions for galaxyproject/foundry, covering working in the galaxy workflow foundry, read first, then orient, authoring rules and don't.
2 2d ago A 2,596 tokens
Instructions file
Claude Code instructions for galaxyproject/foundry, a project described as: The Galaxy Workflow Knowledge Base.
2 2d ago A 40 tokens
Plugin Claude Code
Cast skills produced by the Galaxy Workflow Foundry — corpus-grounded, schema-validated workflow construction actions for Galaxy and friends.
2 2d ago A
tokens not measured
Skill Claude CodeCodex
Advance the gxformat2 draft by one step: pick the next drafty step, resolve a wrapper, implement the step, and validate.
2 2d ago A 36 tokens
Skill Claude CodeCodex
Apply a reviewed change-set to a concrete Galaxy workflow: untouched regions preserved, tool-introducing edits injected as drafty steps.
2 2d ago A 36 tokens
Skill Claude CodeCodex
Author a new Galaxy user-defined tool YAML definition when discovery yields nothing acceptable.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Carry an existing Galaxy workflow's tests forward as a regression baseline and augment them for a change-set's deltas, emitting a Galaxy test plan.
2 2d ago A 38 tokens
Skill Claude CodeCodex
Find nearest IWC exemplar(s) and surface a structural diff against the upstream Galaxy design briefs to guide template authoring.
2 2d ago A 33 tokens
Skill Claude CodeCodex
Convert one nf-core module dir into a Galaxy tool wrapper (tool.xml + macros.xml + provenance.yml + remote-URL blocks).
2 2d ago A 43 tokens
Skill Claude CodeCodex
Translate a CWL summary into a Galaxy data-flow design brief.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Map a CWL summary into a Galaxy workflow interface design brief.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Follow the procedure below and use the artifact/reference sections as the runtime contract.
2 2d ago A 29 tokens
Skill Claude CodeCodex
Translate CWL test fixtures into a Galaxy workflow test plan.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Resolve a CWL workflow's own declared test cases into Galaxy workflow test-data refs.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Triage failing CWL run outputs; classify failure modes; propose fixes.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Triage failing Galaxy run outputs; classify the failure surface and capture evidence before recommending repairs.
2 2d ago A 26 tokens
Skill Claude CodeCodex
Search the Tool Shed for an existing wrapper, drill from hit to a pinnable changeset, classify candidates, and recommend or fall through.
2 2d ago A 33 tokens
Skill Claude CodeCodex
Search IWC fixtures and public sources for test data matching a data-flow shape.
2 2d ago A 20 tokens
Skill Claude CodeCodex
Translate a free-form source summary into a CWL workflow design brief.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Translate a free-form source summary into a Galaxy data-flow design brief.
2 2d ago A 24 tokens