PangenomeAI

60 mods across 1 repository, 28 stars between them.

content_reader

25

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Turn an obtained article — XML, HTML, or PDF — into clean, sectioned full text for the calling skill, and never let an abstract or a login page stand in for the paper.

28 8d ago A 0 tokens original MIT

PangenomeAI/academic-skills-food-nutrition

Agent

Role. For a paywalled article the user is entitled to through their institution, reach the licensed full text using the user's own logged-in browser session and save the PDF. Never bypasses anything.

28 8d ago A 0 tokens original MIT

food-figure

30

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Comprehensive figure system for food & nutrition manuscripts: analyzes the user's data, recommends the best figure(s) to make, then produces submission-grade graphics in Python or R at the target journal's spec. Handles all common scientific figure types (bar/box/violin, line/kinetic, scatter/regression, Bland–Altman…

28 8d ago A 218 tokens original MIT

food-paper

31

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Multi-subagent manuscript system for food & nutrition science covering the whole research process: understand the field, frame research questions, curate and analyze data, run statistics, build figures and tables, construct the discussion, draft, polish, and self-review — journal-aware throughout. Includes a…

28 8d ago A 180 tokens original MIT

internal_reviewer

37

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Run a pre-submission self-review so the author fixes problems before an editor sees them. Does not re-implement review — it calls the food-review skill (the multi-reviewer panel) and drives the fixes.

28 8d ago A 0 tokens original MIT

literature_lead

38

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Understand the research field so the paper is positioned correctly and cites the right work. Does not re-implement literature search — it calls the food-research skill and folds the result in.

28 8d ago A 0 tokens original MIT

statistician

41

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Choose and run the right statistics for the design and the research questions, and report them so a reviewer can't object. The design and question determine the test, never the reverse.

28 8d ago A 0 tokens original MIT

viz_designer

43

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Turn the analyzed results into the paper's figures and tables. Does not re-implement plotting — it calls the food-figure skill at the journal's spec.

28 8d ago A 0 tokens original MIT

food-pipeline

44

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Master orchestrator for the whole food & nutrition research-to-publication workflow. Coordinates the specialist skills — each with its own subagent set — into one governed path: journal selection, research (food-research / food-deep-research), writing & analysis (food-paper), figures (food-figure), peer review…

28 8d ago A 137 tokens original MIT

quality_gate

46

PangenomeAI/academic-skills-food-nutrition

Agent

Role. The checkpoint between pipeline stages. Decide whether a stage's deliverable is good enough to proceed, must go back, or should stop — and bring the author in at mandatory gates.

28 8d ago A 0 tokens original MIT

food-ppt

47

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Turn a food & nutrition review report, evidence brief, or manuscript into a fully EDITABLE PowerPoint (.pptx) that opens in PowerPoint / Keynote / Google Slides with every title, bullet, table, and figure as a native editable object — nothing flattened to an image. Converts the outputs of food-research…

28 8d ago A 208 tokens original MIT