PangenomeAI

60 mods across 1 repository, 28 stars between them.

PangenomeAI/academic-skills-food-nutrition

Plugin Claude Code

Original, MIT-licensed academic skills for food, nutrition & agricultural science — research, journal-aware writing, peer review, orchestration, journal author-guideline skills, and scientific figure generation — for Claude Code, Codex, MiniMax Agent, and OpenClaw.

28 8d ago A tokens not measured original MIT

PangenomeAI/academic-skills-food-nutrition

Plugin Claude Code

Original, MIT-licensed academic skills for food, nutrition & agricultural science: research, journal-aware writing, peer review, and end-to-end orchestration, plus publisher-tiered journal author-guideline skills (food, nutrition, agriculture Q1/Q2, and multidisciplinary) and a scientific figure workflow, for Claude…

28 8d ago A tokens not measured original MIT

PangenomeAI/academic-skills-food-nutrition

Instructions file CodexOpenCode

Instructions for PangenomeAI/academic-skills-food-nutrition, covering what this project is, golden rule — branching, … make changes …, always keep docs current (required in the same change) and releases (automatic on major updates).

28 8d ago A 2,174 tokens original MIT

agri-deep-research

04

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Deep research producing a fully written, source-validated literature review on an agricultural question, as a senior agricultural scientist of the relevant discipline: scope, design the method, discover and screen by journal ranking, validate every source, extract and verify evidence, synthesize, stress-test, then…

28 8d ago A 154 tokens original MIT

agri-paper

05

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Multi-subagent manuscript system for agricultural science, written as a senior agricultural scientist of the relevant discipline: understand the field, frame questions, curate data, run statistics, build figures and tables, construct the discussion, draft, polish, and self-review — journal-aware throughout. Same…

28 8d ago A 173 tokens original MIT

agri-pipeline

06

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Master orchestrator for the whole agricultural research-to-publication workflow, run as a senior agricultural scientist. Coordinates the agri skills — journal selection, research (agri-research or agri-deep-research), writing and analysis (agri-paper), figures (food-figure), peer review (agri-review), revision and…

28 8d ago A 157 tokens original MIT

agri-ppt

07

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Turn an agricultural-science review report, evidence brief, or manuscript into a fully EDITABLE PowerPoint (.pptx) — every title, bullet, table, and figure a native editable object, nothing flattened to an image. Same machinery as food-ppt, but for agricultural work: converts the outputs of agri-research…

28 8d ago A 184 tokens original MIT

agri-research

08

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Run a comprehensive, multi-source literature and evidence-synthesis workflow for agricultural science, as a senior agricultural scientist of the relevant discipline (agronomy, soil science, horticulture, dairy and animal science, agricultural engineering, or agricultural economics). Same machinery as food-research…

28 8d ago A 169 tokens original MIT

agri-review

09

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Multi-reviewer peer-review system for agricultural manuscripts. Simulates an editorial panel — a coordinating editor, three domain reviewers (methodology, domain/novelty, integrity/ethics) and a devil's advocate — plus a formatting check against the target journal, all acting as senior agricultural scientists. Same…

28 8d ago A 155 tokens original MIT

food-deep-research

10

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

General-purpose deep research that produces a fully written, source-validated literature review on any question: scope it, design the method, discover and screen sources by journal ranking, validate every source, extract and verify evidence, synthesize, stress-test, then write and format the review (APA 7.0 by…

28 8d ago A 166 tokens original MIT

claim_verifier

12

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Independently check the claims the review will rest on, against the validated sources they cite. Sources have already been validated for existence and credibility (sourceverifier); here the job is that each claim faithfully reflects what its source actually says.

28 8d ago A 0 tokens original MIT

compiler

13

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Write the literature-review draft from the synthesis and bibliography, formatted to the required style. Prioritize the upstream materials over your own prior knowledge; do not fabricate.

28 8d ago A 0 tokens original MIT

critic

14

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Try to break the synthesis before it becomes a draft. A good critique here saves a flawed argument from being written up. (Editorial critique of the written draft is a separate step — see editor.).

28 8d ago A 0 tokens original MIT

editor

15

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Review the written literature-review draft as a journal editor would and return actionable feedback. Review only — do not rewrite; hand fixes back to compiler.

28 8d ago A 0 tokens original MIT

investigator

17

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Discover candidate sources and, once they are prioritized and validated, extract evidence from them per sub-question. One investigator per independent sub-question; run them in parallel. Evidence is only extracted from validated sources (those that passed sourcescreener and sourceverifier).

28 8d ago A 0 tokens original MIT

research_architect

18

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Turn the Research Scope Brief into a methodology blueprint for the review: how it will be searched, screened, appraised, and synthesized. The question determines the method, never the reverse.

28 8d ago A 0 tokens original MIT

research_scope

19

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Define a comprehensive research scope before any investigation. The scope is the contract the rest of the pipeline is measured against; a shallow scope produces a shallow review.

28 8d ago A 0 tokens original MIT

source_verifier

21

PangenomeAI/academic-skills-food-nutrition

Agent

Role. The quality gatekeeper. Confirm each prioritized source exists, is credible, and is not compromised before any evidence is extracted from it. Investigation and claim-checking downstream operate only on sources that pass here.

28 8d ago A 0 tokens original MIT

synthesizer

22

PangenomeAI/academic-skills-food-nutrition

Agent

Role. Integrate the verified evidence into a coherent, well-argued understanding — the analytical heart of the review. Go beyond listing findings: organize them, reconcile conflicts, and build the narrative the compiler will write from.

28 8d ago A 0 tokens original MIT

food-fetch

23

PangenomeAI/academic-skills-food-nutrition

Skill Claude CodeCodex

Lawfully acquire the full text of academic articles so the research and review skills can read papers, not just abstracts. Routes each article through legal open access (Unpaywall/OpenAlex/PMC/arXiv), the user's own reference-manager library (EndNote/Zotero/Mendeley PDFs), and — only with the user's own logged-in…

28 8d ago A 197 tokens original MIT