Scientific

10,765 mods in this category, of every kind an agent can take. Each one carries what it costs per session, what the scan found, and whether it is the original.

nexu-io/open-design

Skill Claude CodeCodex

Structured medical case presentation for clinical rounds, conferences, and documentation. Generates SOAP-format or narrative case reports with physiologically accurate vitals, labs, and evidence-based plans. Use when the brief mentions "case report", "case presentation", "SOAP note", "clinical case", "ward rounds"…

not rated 94k +578 today A 73 tokens original Apache-2.0

gsap-plugins

02

calesthio/OpenMontage

Skill Claude CodeCodex

Official GSAP skill for GSAP plugins — registration, ScrollToPlugin, ScrollSmoother, Flip, Draggable, Inertia, Observer, SplitText, ScrambleText, SVG and physics plugins, CustomEase, EasePack, CustomWiggle, CustomBounce, GSDevTools. Use when the user asks about a GSAP plugin, scroll-to, flip animations, draggable, SVG…

not rated 56k +783 12d ago A 91 tokens AGPL-3.0

K-Dense-AI/scientific-agent-skills

Instructions file CodexOpenCode

AGENTS.md instructions for K-Dense-AI/scientific-agent-skills, covering repository guidance, what belongs here, layout, creating a skill and skill title.

not rated 42k +2.5k yesterday A 4,326 tokens original MIT

nature-figure

05

Yuan1z0825/nature-skills

Skill Claude CodeCodex

Create, revise, audit, and export submission-grade scientific figures for Nature-family and other high-impact venues in Python (matplotlib/seaborn) or R (ggplot2/patchwork/ComplexHeatmap), including multi-panel plots, figures4papers-style work, and journal-ready SVG/PDF/TIFF outputs. Use for paper or scientific plots…

not rated 38k +456 3d ago A 235 tokens original Apache-2.0

timesfm-forecasting

06

google-research/timesfm

Skill Claude CodeCodex

Zero-shot time series forecasting with Google's TimesFM foundation model. Use this skill when forecasting ANY univariate time series — sales, sensor readings, stock prices, energy demand, patient vitals, weather, or scientific measurements — without training a custom model. Supports both basic forecasting and advanced…

not rated 31k +478 yesterday A 140 tokens original Apache-2.0

fba-runner

07

aiming-lab/AutoResearchClaw

Agent

FBA simulation agent. Runs standard FBA, parsimonious FBA, Flux Variability Analysis, and gene/reaction knockout simulations using COBRApy. Use after a validated metabolic model is available and the user wants to compute growth rates, flux distributions, or knockout phenotypes.

not rated 14k +19 16d ago A 62 tokens original MIT

flux-analyzer

08

aiming-lab/AutoResearchClaw

Agent

Metabolic flux analysis agent. Performs gene essentiality analysis, phenotypic phase plane construction, flux sampling, and subsystem-level pathway analysis. Use after FBA simulations are complete and the user wants deeper phenotypic characterisation or to identify metabolic engineering targets.

not rated 14k +19 16d ago A 56 tokens original MIT

aiming-lab/AutoResearchClaw

Agent

Metabolic phenotype interpretation and publication figure agent. Compares wild-type vs. mutant flux distributions, predicts maximum theoretical product yields, identifies metabolic bottlenecks, and generates publication-quality metabolic maps and charts. Use after flux analysis is complete and the user needs…

not rated 14k +19 16d ago A 64 tokens original MIT

fba-simulator

10

aiming-lab/AutoResearchClaw

Skill Claude CodeCodex

Run Flux Balance Analysis (FBA) and related constraint-based simulations using COBRApy. Covers standard FBA, parsimonious FBA (pFBA), Flux Variability Analysis (FVA), loopless FBA, gene/reaction knockouts, and carbon source swapping. Outputs flux distributions and CSV files.

not rated 14k +19 16d ago A 69 tokens original MIT

quantum-qiskit

11

aiming-lab/AutoResearchClaw

Skill Claude CodeCodex

Reference qiskit 2.x patterns for variational quantum machine learning. Covers data-encoding feature maps, variational quantum classifier (VQC) training, variational quantum eigensolver (VQE) for chemistry, matrix-product-state circuits, and noise model integration. Use when writing Python code that imports qiskit…

not rated 14k +19 16d ago A 102 tokens original MIT

modal-compute

12

companion-inc/feynman

Skill Claude CodeCodex

Run explicitly chosen research benchmark or replication jobs on Modal's serverless infrastructure. Use when a Feynman research workflow needs burst remote GPU compute and the Modal CLI is available.

not rated 8.8k +33 8d ago A 39 tokens original MIT

Upsonic/Upsonic

Skill Claude CodeCodex

Set up and manage the experiment folder structure. This is Phase 0 — it runs before any analysis begins. All bookkeeping files are JSON (never markdown).

not rated 7.9k 2mo ago A 0 tokens original MIT

Master-cai/Research-Paper-Writing-Skills

Skill Claude CodeCodex

Improve academic paper writing quality for ML/CV/NLP-style papers with clear section structure, paragraph flow, and reviewer-facing presentation. Use when drafting or revising Abstract, Introduction, Related Work, Method, Experiments, or Conclusion; polishing figures/tables; checking claim-support alignment; or…

not rated 6.5k +71 2mo ago A 68 tokens original MIT

autoresearch:evals

15

uditgoenka/autoresearch

Command Claude Code

Analyze iteration results: trends, plateaus, regressions, recommendations.

not rated 6.0k +9 22d ago A 19 tokens original MIT

annotating-variants

16

maziyarpanahi/openmed

Skill Claude CodeCodex

Annotates VCF variants and normalizes HGVS nomenclature with public, license-free annotators (Ensembl VEP REST, VEP/SnpEff/ANNOVAR offline) and links variants to gnomAD population frequencies and the clinical context OpenMed extracts. Use when the user wants to predict variant consequences, map HGVS to genomic…

not rated 5.2k +11 today A 179 tokens original Apache-2.0

maziyarpanahi/openmed

Skill Claude CodeCodex

Package multiple FHIR R4 resources produced from OpenMed output into a single valid transaction Bundle ready to POST to an EHR, using OpenMed's verified bundle assembler openmed.clinical.exporters.fhir.tobundle. Covers deterministic urn:uuid fullUrls, automatic in-Bundle reference rewriting, request blocks…

not rated 5.2k +11 today A 131 tokens original Apache-2.0

exporting-to-fhir

18

maziyarpanahi/openmed

Skill Claude CodeCodex

Convert OpenMed NER output (entities from openmed.analyzetext) into FHIR R4 resources — Condition, MedicationStatement, Observation — using OpenMed's built-in FHIR R4 export helpers in openmed.clinical.exporters. Covers the verified CodeableConcept builder (coding, codeableconcept, systemuri), deterministic fullUrl…

not rated 5.2k +11 today A 163 tokens original Apache-2.0

r3f-animation

19

zebbern/claude-code-guide

Skill Claude CodeCodex

React Three Fiber animation - useFrame, useAnimations, spring physics, keyframes. Use when animating objects, playing GLTF animations, creating procedural motion, or implementing physics-based movement.

not rated 4.6k +1 yesterday A 43 tokens original MIT

ChenLiu-1996/figures4papers

Skill Claude CodeCodex

Covers publication-ready matplotlib figures for academic papers, slides, and reports—bars, trends, scatter, heatmaps, and multi-panel layouts—with this repository’s house style, print/vector export conventions, and parity with figures4papers demos. Use when the user is finalizing or creating such figures in…

not rated 4.1k +48 14d ago A 111 tokens

5writing

21

jihe520/MathModelAgent

Skill Claude CodeCodex

A paper-writing workflow for mathematical modelling competitions, supporting both Typst and LaTeX. It uses analysis, results, figures, and a competition template to assemble the document.

not rated 4.0k +82 7d ago A 68 tokens

6verity

22

jihe520/MathModelAgent

Skill Claude CodeCodex

A final-checking workflow for mathematical modelling competition papers, using either Typst or LaTeX to build the document. It checks the finished paper and its supporting files before submission.

not rated 4.0k +82 7d ago A 76 tokens

paper2poster-poster

23

Paper2Poster/Paper2Poster

Skill Claude CodeCodex

Use when the user wants to turn an academic paper into a conference poster, poster outline, poster copy deck, poster layout brief, poster.yaml style draft, or Paper2Poster-ready generation package. Trigger for paper-to-poster requests involving PDF papers, arXiv links, manuscripts, PPTX posters, conference…

not rated 3.9k +6 2mo ago A 80 tokens original MIT

pysr

24

astroautomata/PySR

Skill Claude CodeCodex

Use when fitting equations to data with PySR or SymbolicRegression.jl, when a user wants an interpretable formula, symbolic model, scaling law, or empirical relation discovered from numeric data, or when debugging a PySR search that is slow, stuck, or giving poor equations.

not rated 3.7k +2 2d ago A 61 tokens original Apache-2.0

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: