Scientific skills

13,288 tagged Scientific, measured the same way as everything else here.

Browse within: bioinformatics 358LLM 278ai-scientist 271literature-review 243agents 208academic-research 207ai-scientists 193reasoning-agent 193reasoning-language-models 193tool-use 193agent 182biology 177computational-biology 143data-analysis 136

quantum-qiskit

01

aiming-lab/AutoResearchClaw

Skill Claude CodeCodex

Reference qiskit 2.x patterns for variational quantum machine learning. Covers data-encoding feature maps, variational quantum classifier (VQC) training, variational quantum eigensolver (VQE) for chemistry, matrix-product-state circuits, and noise model integration. Use when writing Python code that imports qiskit…

not rated 15k +61 2mo ago A SkillSpector: pass 102 tokens original MIT

autoresearch

02

Orchestra-Research/AI-Research-SKILLs

Skill Claude CodeCodex

Orchestrates end-to-end autonomous AI research projects using a two-loop architecture. The inner loop runs rapid experiment iterations with clear optimization targets. The outer loop synthesizes results, identifies patterns, and steers research direction. Routes to domain-specific skills for execution, supports…

not rated 14k +205 11d ago A SkillSpector: warn 98 tokens original MIT

pos-tagging-fixes

03

spencermountain/compromise

Skill Claude CodeCodex

Diagnose and fix part-of-speech tagging in the compromise source repository. Choose between lexical data, ambiguity clues, indexed neighbour rules, preTagger logic, and postTagger patterns with attention to execution order, side effects, runtime, and bundle size. Use for internal tagging changes, not ordinary…

not rated 12k +4 2d ago A 72 tokens original MIT

ChenLiu-1996/figures4papers

Skill Claude CodeCodex

Covers publication-ready matplotlib figures for academic papers, slides, and reports—bars, trends, scatter, heatmaps, and multi-panel layouts—with this repository’s house style, print/vector export conventions, and parity with figures4papers demos. Use when the user is finalizing or creating such figures in…

not rated 8.8k +206 2d ago A SkillSpector: pass 111 tokens

Master-cai/Research-Paper-Writing-Skills

Skill Codex

Improve academic paper writing quality for ML/CV/NLP-style papers with clear section structure, paragraph flow, and reviewer-facing presentation. Use when drafting or revising Abstract, Introduction, Related Work, Method, Experiments, or Conclusion; polishing figures/tables; checking claim-support alignment; or…

not rated 7.7k +173 4mo ago A Socket: passSnyk: passSkillSpector: pass 68 tokens original MIT

meta-paper-write

06

opensquilla/opensquilla

Skill Claude CodeCodex

Use this meta-skill instead of answering directly when the current user asks to draft or produce a new academic/research paper or LaTeX manuscript. It uses multi-skill orchestration for manuscript workflows that need source search, citation planning, experiment or figure/table placeholders, drafting, length checks…

not rated 7.1k 4d ago A SkillSpector: warn 125 tokens original Apache-2.0

5writing

07

jihe520/MathModelAgent

Skill Claude Code

A paper-writing workflow for mathematical modelling competitions, supporting both Typst and LaTeX. It uses analysis, results, figures, and a competition template to assemble the document.

not rated 6.2k +18 19d ago A Socket: passSnyk: passSkillSpector: pass 68 tokens

sapientinc/PRAXIST

Skill Codex

Convert an existing runnable computer-based research project into a formal Praxist task project, or repair a task harness that fails task-init validation. Use when a user wants an agent to transform AI algorithm, robotics, control, simulation, SLAM, LLM, optimization, or other executable research code into a Praxist…

not rated 5.5k +98 29d ago A SkillSpector: warn 197 tokens

figure-style

09

aipoch/open-science

Skill Claude CodeCodex

Publication-grade correctness and legibility rules for final-deliverable scientific figures, not exploratory plots. Use for a figure that will ship in a report, paper, export, or kept artifact. Covers data fidelity, label economy, color threading, chart choice, layout, and render-then-verify QA without imposing a…

not rated 5.3k +423 changed 28d ago A SkillSpector: pass 91 tokens original Apache-2.0

brycewang-stanford/Auto-Empirical-Research-Skills

Skill Claude CodeCodex

Classical end-to-end empirical analysis workflow in the traditional Python econometric stack — pandas + numpy + scipy + statsmodels + linearmodels + pyfixest + rdrobust + econml + causalml + matplotlib/seaborn. Defaults to economics empirical-paper style (AER / QJE / AEJ) — every run produces a publication-ready…

not rated 4.7k +70 changed 1mo ago A SkillSpector: warn 780 tokens

JetBrains/koog

Skill Claude CodeCodex ✓ vendor

Evaluate arithmetic expressions and return numeric results. Use when a user asks an arithmetic question, requests calculation, or provides a math expression involving numbers, parentheses, and arithmetic operators.

not rated 4.6k +8 today A SkillSpector: pass 39 tokens original Apache-2.0

clinical-reports

12

synthetic-sciences/openscience

Skill Claude Code needs its repo

Write comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full support with templates, regulatory compliance (HIPAA, FDA, ICH-GCP), and validation…

not rated 4.2k +189 changed 1mo ago A SkillSpector: warn 71 tokens original Apache-2.0

pysr

13

astroautomata/PySR

Skill Claude CodeCodex

Use when fitting equations to data with PySR or SymbolicRegression.jl, when a user wants an interpretable formula, symbolic model, scaling law, or empirical relation discovered from numeric data, or when debugging a PySR search that is slow, stuck, or giving poor equations.

not rated 4.1k +281 changed 21d ago A SkillSpector: pass 61 tokens original Apache-2.0

paper2poster-poster

14

Paper2Poster/Paper2Poster

Skill Codex

Use when the user wants to turn an academic paper into a conference poster, poster outline, poster copy deck, poster layout brief, poster.yaml style draft, or Paper2Poster-ready generation package. Trigger for paper-to-poster requests involving PDF papers, arXiv links, manuscripts, PPTX posters, conference…

not rated 4.0k +9 4mo ago A SkillSpector: pass 80 tokens original MIT

peer-review

15

xintaofei/codeg

Skill Claude Code needs its repo

Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for actual review writing, manuscript revision. For evaluating…

not rated 4.0k 4d ago A SkillSpector: warn 71 tokens original Apache-2.0

scientific-slides

16

foryourhealth111-pixel/Vibe-Skills

Skill Claude Code needs its repo

Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design templates, timing guidance, and visual validation. Works with PowerPoint and…

not rated 3.8k +56 2d ago A SkillSpector: warn 65 tokens original Apache-2.0

Adkid-Zephyr/anti-defensive-writing-Skill

Skill Claude CodeCodex

Stops defensive writing across the entire paper lifecycle — writing, revising, cutting, and organizing experiments. Treats the paper as a press conference, not a project summary, lab log, or self-audit: identify the single most publishable strength of the work and build the most favorable, complete, and persuasive…

not rated 3.6k +516 15d ago A SkillSpector: pass 138 tokens original MIT

nature-paper2ppt

18

ResearAI/DeepScientist

Skill Codex

Build a complete but efficient Nature-style Chinese PPTX presentation from a scientific paper, preprint, PDF, article text, abstract, figure legends, or reading notes. Use this skill whenever the user asks to make slides/PPT/PPTX for journal club, group meeting, paper sharing, thesis seminar, lab meeting, department…

not rated 3.4k +10 3mo ago A SkillSpector: pass 130 tokens original Apache-2.0

clinvar-database

19

google-deepmind/science-skills

Skill Claude CodeCodex

Use when needing clinical significance, pathogenicity classifications (e.g., Pathogenic, Benign, VUS), clinical evidence rationales, or finding "hard positive" benchmark controls for human genomic variants.

not rated 3.3k +38 6d ago A SkillSpector: pass 45 tokens original Apache-2.0

alphafold-database

20

FreedomIntelligence/OpenClaw-Medical-Skills

Skill Claude CodeCodex

Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.

not rated 3.1k +12 3mo ago A 55 tokens

totalsegmentator

21

wasserth/TotalSegmentator

Skill Claude CodeCodex

Use for requests involving medical-image files or image-based analysis, especially CT or MR, including anatomy or pathology detection, segmentation, mask creation, modality detection, contrast-phase estimation, quantitative measurements, and body-statistics estimation. Check TotalSegmentator capabilities before using…

not rated 3.1k +11 2d ago A SkillSpector: pass 67 tokens original Apache-2.0

paper-search

22

openags/paper-search-mcp

Skill Claude CodeCodex

Search, download, and read academic papers from 20+ sources (arXiv, PubMed, Semantic Scholar, CrossRef, etc). Use when the user asks to find papers, search for research, look up academic literature, download a paper PDF, or extract text from a paper.

not rated 2.9k +44 changed 19d ago A SkillSpector: pass 62 tokens original MIT

Haojae/scipilot-figure-skill

Skill Claude CodeCodex

A scientific data-visualization adviser that examines a dataset before recommending a chart and preparing a publication-quality figure.

not rated 2.7k +41 4mo ago A 519 tokens original MIT

explain-paper

24

raphaelmansuy/edgequake

Skill Claude CodeCodex

Use EdgeQuake MCP tools as evidence — never invent document lists.

not rated 2.3k +18 today A 0 tokens original Apache-2.0

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: