ai scientist skills

K-Dense-AI/scientific-agent-skills

Skill Claude CodeCodex

Plan, execute, and document validation, verification, and transfer of analytical procedures under the governing framework - ICH Q2(R2) and Q14, USP / / , ICH M10 bioanalytical, CLSI EP, or ISO/IEC 17025. Use for HPLC, LC-MS/MS, GC, CE, ICP-MS, dissolution, qNMR, qPCR, NIR, and ligand binding or cell-based assays…

K-Dense-AI/scientific-agent-skills

Skill Claude CodeCodex

Query and download public cancer imaging data from NCI Imaging Data Commons. Invoke for any question about IDC collections, cancer imaging datasets, DICOM data access, radiology (CT, MR, PET) or pathology AI training sets, metadata queries, visualization, or license checks — even when the user doesn't explicitly…

K-Dense-AI/scientific-agent-skills

Skill Claude CodeCodex

Design custom laboratory hardware as parametric build123d models and export fabrication-ready STEP, STL, and DXF files - microfluidic chips and molds, optomechanical mounts and breadboard adapters, cuvette and microplate holders, tube racks, animal-behavior rigs, and 3D-printed instrument fixtures. Use when a research…

openags/paper-search-mcp

Skill Claude CodeCodex

Search, download, and read academic papers from 20+ sources (arXiv, PubMed, Semantic Scholar, CrossRef, etc). Use when the user asks to find papers, search for research, look up academic literature, download a paper PDF, or extract text from a paper.

ai4s-research/open-science

Skill Claude CodeCodex

Use when the user asks to run heavy or GPU work on Modal (the cloud compute platform) — writing a Modal function in the workspace, running it with the user's own modal CLI + token, and bringing results back. Data-to-compute for jobs too big for the laptop, without a Slurm cluster.

ai4s-research/open-science

Skill Claude CodeCodex

Use whenever you generate or review a chart, plot, table, or paper figure in this workspace, including work delegated by paper-writing, literature-survey, and experiment skills. Applies the Open Science publication style, enforces readable final-size layout for figures and tables, and rejects generic diagram-tool…

ai4s-research/open-science

Skill Claude CodeCodex

Use when the user asks to run, submit, monitor, or cancel a job on a remote machine over SSH — their own GPU/CPU server, a workstation, or a Slurm cluster ("the cluster", a login node, "my 3090 box", "the compute server"). Picks a saved machine, runs the work directly over SSH (or via Slurm when present), tracks it…

OpenRaiser/NanoResearch

Skill Claude CodeCodex

Guides researchers through structured ideation frameworks to discover high-impact research directions. Use when exploring new problem spaces, pivoting between projects, or seeking novel angles on existing work.

OpenLAIR/dr-claw

Skill Claude CodeCodex

Draft a structured grant proposal from research ideas and literature. Supports KAKENHI (Japan), NSF (US), NSFC (China, including 面上/青年/优青/杰青/海外优青/重点), ERC (EU), DFG (Germany), SNSF (Switzerland), ARC (Australia), NWO (Netherlands), and generic formats. Use when user says "write grant", "grant proposal", "申請書", "write…

OpenLAIR/dr-claw

Skill Claude CodeCodex

Generate publication-quality AI illustrations for academic papers using Gemini image generation. Creates architecture diagrams, method illustrations with Claude-supervised iterative refinement loop. Use when user says "生成图表", "画架构图", "AI绘图", "paper illustration", "generate diagram", or needs visual figures for papers.

OpenLAIR/dr-claw

Skill Claude CodeCodex

Turn a vague research direction into a problem-anchored, elegant, frontier-aware, implementation-oriented method plan via iterative GPT-5.4 review. Use when the user says "refine my approach", "帮我细化方案", "decompose this problem", "打磨idea", "refine research plan", "细化研究方案", or wants a concrete research method that stays…

yogsoth-ai/de-anthropocentric-research-engine

Skill Claude CodeCodex

Retrieve one specified academic paper (by title, arXiv ID, DOI, URL, or a local .md/.txt/.pdf path the caller already has) and land it on disk as source.md plus a source.meta.json carrying a line-number section index. Checks context/papers/ for an existing copy first; local files and direct PDF URLs are read directly…

yogsoth-ai/de-anthropocentric-research-engine

Skill Claude CodeCodex

Reconstruct a DARE skill repo's true use-dependency relations and render them as a self-contained, offline, Obsidian-style interactive HTML graph (pyvis / vis-network). Use this whenever the user wants to graph / map / visualize the skill dependencies of a repo or package, "画依赖图 / graph 化这个 repo / 把 skill 连边画出来 / 用…

yogsoth-ai/de-anthropocentric-research-engine

Skill Claude CodeCodex

Understand who the user is — background, resources, constraints, and deep motivations. Produces an ActorProfile that informs all downstream decisions. Use this tactic at the start of any crystallization process to build a model of the user's capabilities, limitations, and intent.

Sibyl-Research-Team/AutoResearch-SibylSystem

Skill Claude CodeCodex

A skill that asks OpenAI Codex to review work as an independent third party. It adds a separate AI perspective to an existing review.

Sibyl-Research-Team/AutoResearch-SibylSystem

Skill Claude CodeCodex

A writing agent that uses OpenAI Codex, an AI coding and reasoning assistant, to write academic papers. The description does not specify which paper sections or formats it supports.

Sibyl-Research-Team/AutoResearch-SibylSystem

Skill Claude CodeCodex

A research-data assistant that synchronises data with Feishu cloud storage, an online workspace used to store and share files and information.

ai4s-research/ai4s-skills

Skill Claude CodeCodex

Use when the user has a research question and needs a complete experiment package — design document, runnable code, results (measured or simulated with honest provenance), publication-grade figures, structured report. Single-stage, no Python runtime.

ai4s-research/ai4s-skills

Skill Claude CodeCodex

Use when the user wants a paper audited for integrity issues — image misuse, numerical anomalies, logical gaps — and needs a reviewable evidence report. Works on external papers (PDF / DOI / arXiv) and on outputs from a local paper-writer run. Single-stage skill.

ai4s-research/ai4s-skills

Skill Claude CodeCodex

Generate beautiful, high-resolution mindmaps from Markdown unordered lists. Outputs interactive HTML, HD PNG, and PDF with colorful branch themes.

wanshuiyin/Anti-Autoresearch

Skill Claude CodeCodex

Audit whether a paper's baseline comparisons are COMPLETE, FAIR, and SIGNIFICANT: a required recent SOTA baseline is missing while 'best/SOTA' is claimed (HP-MISSING-BASELINE); a baseline is undertuned / given less compute-tuning-data, run at a mismatched config, or the equal-budget ablation-as-baseline is absent…

wanshuiyin/Anti-Autoresearch

Skill Claude CodeCodex

Audit whether a paper's EVALUATION DESIGN actually measures what it claims and whether its reporting is complete — the validity layer family D (experiment-forensics) cannot reach. Three patterns: train/test leakage means the reported score may not measure generalization (HP-EVAL-LEAKAGE — adopts the Kapoor & Narayanan…

wanshuiyin/Anti-Autoresearch

Skill Claude CodeCodex

MEMO-ONLY prior-work overlap advisory: surfaces the two ADVISORY taxonomy signals neither a tool nor a model can decide from the paper alone — ADV-TRIVIAL-COMBINATION (standard A+B+C / 缝合 stapling) and ADV-DUPLICATE-PUBLICATION (repackaged / duplicate submission). The executor RETRIEVES candidate prior work (DBLP…

Omni-Scientist/OmniScientist

Skill Claude CodeCodex

Run OmniScientist end to end in the OmniScientist CLI using DeepSeek V4 Flash. Turn raw research data (images, signals, audio, video, 3-D, tables, or graphs) and an open direction into perceived evidence, a falsifiable hypothesis, recorded analysis, real citations, a gated candidate paper, PDF, and Overleaf bundle.…