Scientific mcp servers

366 tagged Scientific, measured the same way as everything else here.

Browse within: bioinformatics 41pipeworx 21data-science 11fastmcp 10multiomics 10precision-medicine 10transcriptomics 10drug-discovery 9genomics 9ai4science 8healthcare 8llm-tools 8python 8hpc 7

biorender

01

anthropics/knowledge-work-plugins

MCP server Claude CodeCodexCursor +2

BioRender's hosted server: lets the agent create and edit scientific figures and diagrams in BioRender. Remote server at mcp.services.biorender.com.

24k +32 today A tokens not measured original Apache-2.0

tooluniverse

02

mims-harvard/ToolUniverse

MCP server Claude CodeCodexCursor +2

A comprehensive collection of scientific tools for Agentic AI, offering integration with the ToolUniverse SDK and MCP Server to support advanced scientific workflows. Runs locally from the tooluniverse Python package. Needs 3 environment variables to run.

1.7k 2d ago A tokens not measured original Apache-2.0

drawio-live

03

icebird1998/drawio-scientific-illustrator

MCP server Claude CodeCodexCursor +2

MCP server "drawio-live" as configured in icebird1998/drawio-scientific-illustrator. Runs ./scripts/live-server.mjs with node.

1.4k 1mo ago A tokens not measured original MIT

drawio-file-utils

04

icebird1998/drawio-scientific-illustrator

MCP server Claude CodeCodexCursor +2

MCP server "drawio-file-utils" as configured in icebird1998/drawio-scientific-illustrator. Runs ./scripts/server.mjs with node.

1.4k 1mo ago A tokens not measured original MIT

drawio-live

05

icebird1998/scientific-illustrator

MCP server Claude CodeCodexCursor +2

MCP server "drawio-live" as configured in icebird1998/scientific-illustrator. Runs ./scripts/live-server.mjs with node.

722 24d ago A tokens not measured copy · 100% MIT

drawio-file-utils

06

icebird1998/scientific-illustrator

MCP server Claude CodeCodexCursor +2

MCP server "drawio-file-utils" as configured in icebird1998/scientific-illustrator. Runs ./scripts/server.mjs with node.

722 24d ago A tokens not measured copy · 100% MIT

powerpoint-live

07

icebird1998/scientific-illustrator

MCP server Claude CodeCodexCursor +2

MCP server "powerpoint-live" as configured in icebird1998/scientific-illustrator. Runs ./scripts/powerpoint-server.mjs with node.

722 24d ago A tokens not measured original MIT

web-extractor

08

ZimoLiao/scholaraio

MCP server Claude CodeCodexCursor +2

MCP server "web-extractor", hosted remotely at 127.0.0.1, as configured in ZimoLiao/scholaraio.

566 2d ago A tokens not measured original MIT

Clinical Trials

09

anthropics/healthcare

MCP server Claude CodeCodexCursor +2

One of Anthropic's hosted health and life-sciences servers (bioRxiv/medRxiv preprints, ClinicalTrials.gov, ChEMBL and others): lets the agent search and read that source directly. Remote server at hcls.mcp.claude.com.

402 5d ago A tokens not measured

clauder

10

IMNMV/ClaudeR

MCP server Claude CodeCodexCursor +2

MCP server connecting AI assistants to RStudio for interactive R coding and data analysis. Runs locally from the clauder-mcp Python package.

329 yesterday A tokens not measured

spmind

11

tomtommyyuan/spmind

MCP server Claude CodeCodexCursor +2

MCP server "spmind" as configured in tomtommyyuan/spmind. Runs spmind.mcp_stdio with python.

277 1mo ago A tokens not measured original Apache-2.0

codex-mcp

12

SepineTam/mcp-for-stata

MCP server Claude CodeCodexCursor +2

MCP server "codex-mcp" as configured in SepineTam/mcp-for-stata. Launched with codex mcp-server.

253 yesterday A tokens not measured AGPL-3.0

gyoshu-mcp

13

Yeachan-Heo/My-Jogyo

MCP server Claude CodeCodexCursor +2

MCP server "gyoshu-mcp" as configured in Yeachan-Heo/My-Jogyo. Launched with /home/bellman/Workspace/My-Jogyo/src/mcp/build/index.cjs.

244 6mo ago A tokens not measured

neo4j-gds

14

neo4j-contrib/gds-agent

MCP server Claude CodeCodexCursor +2

MCP server "neo4j-gds" as configured in neo4j-contrib/gds-agent. Runs locally from the src/mcp_server_neo4j_gds Python package.

96 3d ago A tokens not measured original MIT

gds-agent

15

neo4j-contrib/gds-agent

MCP server Claude CodeCodexCursor +2

Neo4j GDS MCP Server. Runs locally from the gds-agent Python package. Needs 7 environment variables to run.

96 3d ago A tokens not measured original MIT

kaggle

16

shepsci/kaggle-skill

MCP server Claude CodeCodexCursor +2

MCP server "kaggle", hosted remotely at www.kaggle.com, as configured in shepsci/kaggle-skill.

84 1mo ago A tokens not measured original MIT

omnisim

17

omnilink-tech/omnisim

MCP server Claude CodeCodexCursor +2

MCP server "omnisim" as configured in omnilink-tech/omnisim. Runs omnisim_mcp with python. Needs 2 environment variables to run.

82 2d ago A tokens not measured original Apache-2.0

chemmcp

19

OSU-NLP-Group/ChemMCP

MCP server Claude CodeCodexCursor +2

MCP server "chemmcp" as configured in OSU-NLP-Group/ChemMCP. Runs locally from the ChemMCP Python package.

71 1y ago A tokens not measured original Apache-2.0

context7

20

xvirobotics/metaskill

MCP server Claude CodeCodexCursor +2

Gives the agent up-to-date documentation and code examples for libraries and frameworks, fetched on demand so answers are not stuck at the model's training cutoff. Runs locally from the @upstash/context7-mcp npm package.

67 6mo ago A tokens not measured copy · 88% MIT

sequential-thinking

21

xvirobotics/metaskill

MCP server Claude CodeCodexCursor +2

Adds a structured step-by-step reasoning tool the agent can call to break a problem into revisable thoughts. Runs locally from the @modelcontextprotocol/server-sequential-thinking npm package.

67 6mo ago A tokens not measured copy · 88% MIT

memory

22

xvirobotics/metaskill

MCP server Claude CodeCodexCursor +2

Gives the agent a persistent knowledge graph it can write facts to and recall across sessions. Runs locally from the @modelcontextprotocol/server-memory npm package.

67 6mo ago A tokens not measured original MIT

oac-mcp-server

23

oracle-samples/oracle-aidp-samples

MCP server Claude CodeCodexCursor +2

MCP server "oac-mcp-server" as configured in oracle-samples/oracle-aidp-samples. Runs ${OAC_MCP_CONNECT_PATH} with node.

46 yesterday A tokens not measured UPL-1.0

chatspatial

24

cafferychen777/ChatSpatial

MCP server Claude CodeCodexCursor +2

ChatSpatial: Natural language-driven spatial transcriptomics analysis via Model Context Protocol (MCP) integration. Runs locally from the chatspatial Python package.

44 17d ago A tokens not measured original MIT