Agent
Execute ENCODE ATAC-seq pipeline from FASTQ to accessibility peaks with Tn5 correction, Bowtie2, and MACS2.
24 1mo ago A 34 tokens
AGPL-3.0
Agent
Execute ENCODE ChIP-seq pipeline from FASTQ to peaks and signal tracks using BWA-MEM, MACS2, and IDR.
24 1mo ago A 34 tokens
AGPL-3.0
Agent
Execute CUT&RUN pipeline from FASTQ to peaks with Bowtie2, SEACR, and spike-in normalization.
24 1mo ago A 29 tokens
AGPL-3.0