Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when adding, renaming, or modifying this backend's FastAPI routes, dependencies, middleware, or response behavior.
Skill Claude CodeCodex
Use when bringing this repo into compliance with a GeneFoundry fleet standard (tool-naming, response-envelope, container-hardening, versioning, MCP transport, or logging) or closing its tracking issue.
Skill Claude CodeCodex
Use when adding, renaming, or changing this backend's MCP tools, resources, prompts, or input/output schemas.
Skill Claude CodeCodex
Use when preparing to tag, publish, or promote a metadome-link build.
Skill Claude CodeCodex
Use when reviewing this backend for security before deploy, when touching auth/logging/upstream-fetch/container config, or when answering an infosec/DSB question.
Instructions file CodexOpenCode
AGENTS.md instructions for berntpopp/metadome-link, covering agents.md — metadome-link, what this is, two planes (non-negotiable boundary), async model and invariants.
Instructions file
Claude Code instructions for berntpopp/metadome-link, covering claude.md, essentials, common commands, two-plane invariants (non-negotiable) and documentation.
MCP server Claude CodeCodexCursor
MCP server "metadome-link" as configured in berntpopp/metadome-link. Runs locally from the metadome-link Python package.
Skill Claude CodeCodex
Use when make ci-local fails locally or a GitHub Actions run reports a CI failure (format, lint, line-budget, typecheck, or test errors).
Skill Claude CodeCodex
Use when reviewing a diff, PR, or change set for correctness and quality before merge or handoff. For a deep security-only pass, use security-review instead.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when adding, renaming, or modifying this backend's FastAPI routes, dependencies, middleware, or response behavior.
Skill Claude CodeCodex
Use when bringing this repo into compliance with a GeneFoundry fleet standard (tool-naming, response-envelope, container-hardening, versioning, MCP transport, or logging) or closing its tracking issue.
Skill Claude CodeCodex
Use when adding, renaming, or changing this backend's MCP tools, resources, prompts, or input/output schemas.
Skill Claude CodeCodex
Use when preparing to tag, publish, or promote a clingen-link build.
Skill Claude CodeCodex
Use when reviewing this backend for security before deploy, when touching auth/logging/upstream-fetch/container config, or when answering an infosec/DSB question.
Instructions file CodexOpenCode
AGENTS.md instructions for berntpopp/clingen-link, covering agents.md, project, source of truth, snapshot / refresh workflow and commands.
Instructions file
Claude Code instructions for berntpopp/clingen-link, a project described as: MCP server for ClinGen (Clinical Genome Resource): gene–disease validity, dosage sensitivity, clinical actionability, and expert-panel variant pathogenicity (ERepo) — as typed tools for LLM agents.
MCP server Claude CodeCodexCursor
MCP server "clingen-link" as configured in berntpopp/clingen-link. Runs locally from the clingen-link Python package.
Skill Claude CodeCodex
Use when CI fails on a PR or main in gencc-link. Walks through reproducing make ci-local locally and root-causing without bypassing checks.
Skill Claude CodeCodex
Use when reviewing a diff, PR, or change set for correctness and quality before merge or handoff. For a deep security-only pass, use security-review instead.
Skill Claude CodeCodex
Use when changing the GenCC SQLite schema. Coordinates schema.sql, the ingest builder/aggregates, and the repository together, then rebuilds the database and updates tests and fixtures.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.