Skill Claude CodeCodex
Use when CI fails on a PR or main in gencc-link. Walks through reproducing make ci-local locally and root-causing without bypassing checks.
MCP server for GenCC (Gene Curation Coalition): harmonized gene–disease validity classifications across member submitters, with consensus and conflict detection per gene–disease pair.
Skill Claude CodeCodex
Use when CI fails on a PR or main in gencc-link. Walks through reproducing make ci-local locally and root-causing without bypassing checks.
Skill Claude CodeCodex
Use when reviewing a diff, PR, or change set for correctness and quality before merge or handoff. For a deep security-only pass, use security-review instead.
Skill Claude CodeCodex
Use when changing the GenCC SQLite schema. Coordinates schema.sql, the ingest builder/aggregates, and the repository together, then rebuilds the database and updates tests and fixtures.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when adding, renaming, or modifying this backend's FastAPI routes, dependencies, middleware, or response behavior.
Skill Claude CodeCodex
Use when bringing this repo into compliance with a GeneFoundry fleet standard (tool-naming, response-envelope, container-hardening, versioning, MCP transport, or logging) or closing its tracking issue.
Skill Claude CodeCodex
Use when adding, renaming, or removing an MCP tool in gencc-link. Walks through the tool module, facade registration, the capabilities TOOLS tuple, tests, and the README/connection-guide tables.
Skill Claude CodeCodex
Use when preparing a versioned release of gencc-link. Walks through the pre-release checklist — ci-local green, CHANGELOG, version bump, valid docker config — then tagging and watching the release workflow.
Skill Claude CodeCodex
Use when reviewing this backend for security before deploy, when touching auth/logging/upstream-fetch/container config, or when answering an infosec/DSB question.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: