Skill Claude CodeCodex
Use when changing the router's authentication or authorization — JWT/OAuth modes, verifiers, resource/audience metadata, the secure-by-default bind guard, or the no-token-passthrough boundary.
Skill Claude CodeCodex
Use when adding, removing, enabling/disabling, or reconfiguring a backend in the router's servers.yaml registry (URLs, namespaces, entrypoints, servername/transform overrides).
Skill Claude CodeCodex
Use when make ci-local fails locally or a GitHub Actions run reports a CI failure (format, lint, line-budget, typecheck, or test errors).
Skill Claude CodeCodex
Use when reviewing a diff, PR, or change set for correctness and quality before merge or handoff. For a deep security-only pass, use security-review instead.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when working on tool-definition drift detection, MCP transport conformance, the live fleet probe, or the discovery-catalog snapshots that close the CI≠prod gap.
Skill Claude CodeCodex
Use when bringing this repo into compliance with a GeneFoundry fleet standard (tool-naming, response-envelope, container-hardening, versioning, MCP transport, or logging) or closing its tracking issue.
Skill Claude CodeCodex
Use when preparing to tag, publish, or deploy a genefoundry-router build.
Skill Claude CodeCodex
Use when reviewing genefoundry-router security before deploy, when touching auth/proxy/logging/limits config, or when answering an infosec/DSB question.
Skill Claude CodeCodex
Use when changing the router's tool-search / discovery surface — the searchtools or calltool meta-tools, the BM25 index, entrypoint pinning, or hint/normalization rewriting.
Instructions file CodexOpenCode
Instructions for berntpopp/genefoundry-router, covering agents.md, what this project is, required check before handoff, coding standards and project-specific guidance.
Instructions file
Instructions for berntpopp/genefoundry-router, a project described as: MCP gateway federating 21 biomedical MCP servers — gnomAD, ClinVar, HPO, UniProt, Ensembl VEP, PanelApp and more — behind one Streamable-HTTP endpoint, with collision-free namespaced tools and BM25 tool search.
MCP server Claude CodeCodexCursor +2
MCP gateway federating 21 biomedical MCP servers behind one endpoint: gnomAD, ClinVar, HPO, VEP. Remote server at genefoundry.org.
Skill Claude CodeCodex
Use when make ci-local fails locally or a GitHub Actions run reports a CI failure (format, lint, line-budget, typecheck, or test errors).
Skill Claude CodeCodex
Use when reviewing a diff, PR, or change set for correctness and quality before merge or handoff. For a deep security-only pass, use security-review instead.
Skill Claude CodeCodex
Use when handling Dependabot PRs, CodeQL/Trivy alerts, or doing a routine dependency/CVE sweep for this repo.
Skill Claude CodeCodex
Use when adding, renaming, or modifying this backend's FastAPI routes, dependencies, middleware, or response behavior.
Skill Claude CodeCodex
Use when bringing this repo into compliance with a GeneFoundry fleet standard (tool-naming, response-envelope, container-hardening, versioning, MCP transport, or logging) or closing its tracking issue.
Skill Claude CodeCodex
Use when adding, renaming, or changing this backend's MCP tools, resources, prompts, or input/output schemas.
Skill Claude CodeCodex
Use when preparing to tag, publish, or promote a mgi-link build.
Skill Claude CodeCodex
Use when reviewing this backend for security before deploy, when touching auth/logging/upstream-fetch/container config, or when answering an infosec/DSB question.
Instructions file CodexOpenCode
AGENTS.md instructions for berntpopp/mgi-link, covering agents.md — engineering conventions for mgi-link, golden rules, architecture invariants (do not break), data plane and testing.
Instructions file
Claude Code instructions for berntpopp/mgi-link, covering claude.md, tl;dr, common commands and layout.
MCP server Claude CodeCodexCursor
MCP server "mgi-link" as configured in berntpopp/mgi-link. Runs locally from the mgi-link Python package.