Skill Claude CodeCodex
Map a free-form source summary into a Galaxy workflow interface design brief.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Follow the procedure below and use the artifact/reference sections as the runtime contract.
2 2d ago A 28 tokens
Skill Claude CodeCodex
Synthesize a Galaxy workflow test plan from a free-form summary and the Galaxy design briefs.
2 2d ago A 28 tokens
Skill Claude CodeCodex
Convert an abstract step into a concrete CWL CommandLineTool + step.
2 2d ago A 21 tokens
Skill Claude CodeCodex
Assemble CWL job file(s) and expected-output assertions.
2 2d ago A 20 tokens
Skill Claude CodeCodex
Convert an abstract step into a concrete gxformat2 step using a tool summary.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Assemble Galaxy workflow test fixtures and assertions.
2 2d ago A 17 tokens
Skill Claude CodeCodex
Normalize a free-form user interview into the shared freeform-summary workflow handoff.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Interview a user against an existing Galaxy workflow summary and emit a reviewable, step-anchored change-set.
2 2d ago A 34 tokens
Skill Claude CodeCodex
Translate a Nextflow summary into a CWL data-flow design brief.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Map a Nextflow summary into a CWL Workflow interface design brief.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Translate a Nextflow summary into a Galaxy data-flow design brief.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Map a Nextflow summary into a Galaxy workflow interface design brief.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Decide the Galaxy-side shape of external reference data declared by a Nextflow pipeline.
2 2d ago A 27 tokens
Skill Claude CodeCodex
Follow the procedure below and use the artifact/reference sections as the runtime contract.
2 2d ago A 29 tokens
Skill Claude CodeCodex
Translate Nextflow test evidence into a CWL workflow test plan.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Translate Nextflow test evidence into a Galaxy workflow test plan.
2 2d ago A 22 tokens
Skill Claude CodeCodex
Resolve a Nextflow pipeline's own declared test fixtures into Galaxy workflow test-data refs.
2 2d ago A 23 tokens
Skill Claude CodeCodex
Derive workflow test inputs and expected outputs from a paper.
2 2d ago A 17 tokens
Skill Claude CodeCodex
Path from a CWL Workflow to a Galaxy gxformat2 workflow — orchestrates the Foundry skills of the CWL → GALAXY pipeline in order, in a per-run working directory.
2 2d ago A 47 tokens
Skill Claude CodeCodex
Interview-driven path to a Galaxy gxformat2 workflow through the shared freeform-summary handoff — orchestrates the Foundry skills of the INTERVIEW → GALAXY pipeline in order, in a per-run working directory.
2 2d ago A 52 tokens
Skill Claude CodeCodex
Direct path from a Nextflow pipeline to a CWL Workflow + CommandLineTool set — orchestrates the Foundry skills of the NEXTFLOW → CWL pipeline in order, in a per-run working directory.
2 2d ago A 49 tokens
Skill Claude CodeCodex
Direct path from a Nextflow pipeline to a Galaxy gxformat2 workflow — orchestrates the Foundry skills of the NEXTFLOW → GALAXY pipeline in order, in a per-run working directory.
2 2d ago A 48 tokens
Skill Claude CodeCodex
Direct path from a paper to a CWL Workflow + CommandLineTool set — orchestrates the Foundry skills of the PAPER → CWL pipeline in order, in a per-run working directory.
2 2d ago A 45 tokens