nextflow-summary-to-galaxy-interface

nextflow-summary-to-galaxy-interface is a skill for Claude Code from galaxyproject/foundry. It costs 22 tokens per session (1,601 once invoked), scanned A, original, no licence file.

A tool for turning a Nextflow workflow summary into a design brief for its Galaxy interface. Galaxy is a web platform that lets people run scientific data-processing workflows.

In plain words
What is it for?
Use it to plan how a Nextflow workflow should be presented and configured in Galaxy.
Why use it?
It helps translate workflow details into a clear plan for the screens and inputs Galaxy users need.

Skill for Claude Code

Written for Claude Code: shipped in a Claude Code plugin.

Part of the foundry-skills plugin — 55 skills shipped together

Good fit Use it to plan how a Nextflow workflow should be presented and configured in Galaxy.

Compare 6 skills from other repositories ↓
Install with agentmods
npx agentmods add skills/galaxyproject/foundry/nextflow-summary-to-galaxy-interface
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Any agent
npx skills add galaxyproject/foundry --skill nextflow-summary-to-galaxy-interface
Clone the repo
git clone --depth 1 https://github.com/galaxyproject/foundry

Made for: Claude Code.

Or install foundry-skills, the plugin that ships this one along with the rest of its 55 skills.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for nextflow-summary-to-galaxy-interface

README.md
[![agentmods](https://agentmods.dev/badge/skills/galaxyproject/foundry/nextflow-summary-to-galaxy-interface.svg)](https://agentmods.dev/skills/galaxyproject/foundry/nextflow-summary-to-galaxy-interface)
Your own site
<a href="https://agentmods.dev/skills/galaxyproject/foundry/nextflow-summary-to-galaxy-interface"><img src="https://agentmods.dev/badge/skills/galaxyproject/foundry/nextflow-summary-to-galaxy-interface.svg" alt="Measured on agentmods" height="20"></a>
Per session 22 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 1,601 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00022 $0.01601
Opus 5 $0.00011 $0.00800
Sonnet 5 $0.00004 $0.00320
Haiku 4.5 $0.00002 $0.00160

Measured 7d ago against content hash 47a065c0ba3e, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-07, from the pricing page.

Security

Grade A, and why

nextflow-summary-to-galaxy-interface scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 7d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

casts/claude/skills/nextflow-summary-to-galaxy-interface/SKILL.md · 68 lines

The source is not reproduced here

A licence we could not identify

The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 7d ago First seen · 68 lines · 22 tokens per session scan A 47a065c0ba3e

Subscribe to this mod's changes

nextflow-summary-to-galaxy-interface is a skill published in the GitHub repository galaxyproject/foundry (2 stars, last pushed 2d ago), with no licence file. It adds 22 tokens to every session and 1,601 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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