reproducible-research instructions

aipoch/open-science

Instructions file CodexOpenCode

AGENTS.md instructions for aipoch/open-science, covering open science — agent notes, i18n — translating new user-visible strings, key format, how to wrap strings and catalog entry format.

hughjonesd/huxtable

Instructions file CodexOpenCode

AGENTS.md instructions for hughjonesd/huxtable, covering instructions to llm agents, documentation, writing code, tests and docs, testing your work and installing extra components.

K-Dense-AI/science-superpowers

Instructions file CodexOpenCode

AGENTS.md instructions for K-Dense-AI/science-superpowers, a project described as: Composable computational-science methodology skills for AI research agents — pre-registration over TDD. A science-domain reimplementation of Superpowers.

K-Dense-AI/science-superpowers

Instructions file

Claude Code instructions for K-Dense-AI/science-superpowers, covering science superpowers — contributor guidelines, what this project is, design principles (read before changing skills), working on skills and general.

K-Dense-AI/science-superpowers

Instructions file Gemini CLI

Gemini CLI instructions for K-Dense-AI/science-superpowers, a project described as: Composable computational-science methodology skills for AI research agents — pre-registration over TDD. A science-domain reimplementation of Superpowers.

htlin222/meta-pipe

Instructions file CodexOpenCode

AGENTS.md instructions for htlin222/meta-pipe, covering agent instructions, quick start, example: completed meta-analysis, 📁 project structure (important) and pipeline stages & skills.

htlin222/meta-pipe

Instructions file

Claude Code instructions for htlin222/meta-pipe, a project described as: Claude Code-powered end-to-end meta-analysis automation: AI-assisted literature review, screening, extraction, analysis, and manuscript generation for systematic reviews and clinical evidence synthesis.

calkit/calkit

Instructions file CodexOpenCode

Instructions for calkit/calkit, covering agent instructions for working on calkit, repo structure and working.

eweisbrod/example-project

Instructions file CodexOpenCode

AGENTS.md instructions for eweisbrod/example-project, covering agents.md - ai assistant context for example-project, repo role, repo structure, when working in this repo and common pitfalls.

eweisbrod/example-project

Instructions file

Claude Code instructions for eweisbrod/example-project, a project described as: Template for an Accounting or Finance Research Project.

Tom409114/research-repo-doctor

Instructions file GitHub Copilot

Copilot instructions for Tom409114/research-repo-doctor, covering github copilot instructions and work through plan.md without weakening checks.

Tom409114/research-repo-doctor

Instructions file CodexOpenCode

AGENTS.md instructions for Tom409114/research-repo-doctor, covering agents.md, mission, setup, test commands and agent verify loop.

zpower426/datapowers

Instructions file Gemini CLI

Gemini CLI instructions for zpower426/datapowers, a project described as: Professional Data Mining & ML Protocol: A hypothesis-driven workflow featuring strict leakage-guards, three-layer validation, and statistical rigor for robust AI agent deployment.

dongzhaohe321418-lab/zemax-mcp

Instructions file CodexOpenCode

AGENTS.md instructions for dongzhaohe321418-lab/zemax-mcp: This repository is the system of record for the Zemax MCP implementation and its simulations.