bioengineering skills

evo-design/proto-tools

Skill Claude CodeCodex

Fixes tool environment setup failures in proto-tools, either just for the current machine (eject the tool's standalone dir, patch it, and point PROTO STANDALONEDIR at it; works for any install, including a non-editable pip install) or as a cross-platform fix contributed back to the repo. Same diagnosis for both…

evo-design/proto-tools

Skill Claude CodeCodex

Implements a new bioinformatics tool wrapper in proto-tools using a parallelized agent pipeline. Orchestrates phases: Research, Contract (core tool file), Fan-out (5 parallel subagents), Verify, then the decisive gates — Config Field Audit, Temp Integration & Stress, Docs Verification, Self-Audit & Full PR Review …