genomics instructions

ClawBio/ClawBio

Instructions file CodexOpenCode

AGENTS.md instructions for ClawBio/ClawBio, covering agents.md — clawbio guide for ai coding agents, project overview, setup, clone and install dependencies.

ClawBio/ClawBio

Instructions file

Claude Code instructions for ClawBio/ClawBio, covering claude.md — clawbio agent instructions, homepage (index.html) — strict, key files, slash commands and skill routing table.

genomoncology/biomcp

Instructions file CodexOpenCode

Instructions for genomoncology/biomcp, covering agents.md — biomcp, repository contract shape, contract quick reference, gates and skill rail.

jaechang-hits/SciAgent-Skills

Instructions file CodexOpenCode

AGENTS.md instructions for jaechang-hits/SciAgent-Skills, covering skills — workflow guide, directory layout, workflow: topic → entry (5 steps), step 2. choose category and step 3. gather reference material.

jaechang-hits/SciAgent-Skills

Instructions file

Claude Code instructions for jaechang-hits/SciAgent-Skills, a project described as: 197 bioinformatics & life science skills for Claude Code and AI agents — BixBench 92.0% accuracy. RNA-seq, single-cell, drug discovery, proteomics, and more. Powers OmicsHorizon.

broadinstitute/viral-ngs

Instructions file GitHub Copilot

Instructions for broadinstitute/viral-ngs, covering copilot instructions, quick reference, running tests and key files.

broadinstitute/viral-ngs

Instructions file CodexOpenCode

Instructions for broadinstitute/viral-ngs, covering agents.md, development environment, docker-centric development, development workflow and running tests.

broadinstitute/viral-ngs

Instructions file

Instructions for broadinstitute/viral-ngs, covering claude.md, quick reference, running tests and key files.

VerisimilitudeX/DNAnalyzer

Instructions file CodexOpenCode

Instructions for VerisimilitudeX/DNAnalyzer, covering agent guide, what this repository is, canonical references for agents, build and verify and conventions that agents frequently get wrong.

dna-seq/just-dna-lite

Instructions file CodexOpenCode

AGENTS.md instructions for dna-seq/just-dna-lite, covering agent guidelines, repository layout (uv workspace), running the app, uv script entry point collisions and coding standards.

dna-seq/just-dna-lite

Instructions file

Claude Code instructions for dna-seq/just-dna-lite, covering agent guidelines, repository layout (uv workspace), running the app, uv script entry point collisions and dependency pins — where every version constraint lives.

ElliotXie/autozyme

Instructions file

Instructions for ElliotXie/autozyme, covering autozyme, layout, how to use, environment and cli quick reference.

realactivity/tula

Instructions file CodexOpenCode

Instructions for realactivity/tula, covering agents.md - tula repo guide for coding agents, what tula is (30 seconds), repo map, hard rules (non-negotiable) and reference skills (clone these).

realactivity/tula

Instructions file

Instructions for realactivity/tula, covering claude.md - claude code notes, claude code and quick links.

friendsofstrandseq/mosaicatcher-pipeline

Instructions file

Claude Code instructions for friendsofstrandseq/mosaicatcher-pipeline, covering claude.md, project overview, version management, common commands and using pixi (recommended for snakemake v9+).

friendsofstrandseq/mosaicatcher-pipeline

Instructions file Gemini CLI

Gemini CLI instructions for friendsofstrandseq/mosaicatcher-pipeline, covering claude.md, project overview, version management, common commands and using pixi (recommended for snakemake v9+).

nickzren/opentargets-mcp

Instructions file CodexOpenCode

Instructions for nickzren/opentargets-mcp, covering agent guide — opentargets-mcp, what this server is, run locally (stdio), use this server for and triage hints.

nickzren/opentargets-mcp

Instructions file

Instructions for nickzren/opentargets-mcp, a project described as: MCP server for Open Targets data.

45ck/open-genome-agent

Instructions file CodexOpenCode

Instructions for 45ck/open-genome-agent, covering agents.md, core policy, mission, mandatory rules and delegation rules.

45ck/open-genome-agent

Instructions file

Instructions for 45ck/open-genome-agent, covering claude.md, core policy, mission, mandatory rules and delegation rules.

cyanheads/gnomad-genetics-mcp-server

Instructions file CodexOpenCode

AGENTS.md instructions for cyanheads/gnomad-genetics-mcp-server, covering developer protocol, core rules, patterns, server config (src/config/server-config.ts) and server identity and instructions.

cyanheads/gnomad-genetics-mcp-server

Instructions file

Claude Code instructions for cyanheads/gnomad-genetics-mcp-server, covering developer protocol, core rules, patterns, server config (src/config/server-config.ts) and server identity and instructions.

SachinGawande2003/Heuris-BioMCP

Instructions file

Claude Code instructions for SachinGawande2003/Heuris-BioMCP, covering heuris-biomcp agent guidance, what this server is for, recommended workflows, literature and mechanism grounding and translational gene review.

berntpopp/mgi-link

Instructions file CodexOpenCode

AGENTS.md instructions for berntpopp/mgi-link, covering agents.md — engineering conventions for mgi-link, golden rules, architecture invariants (do not break), data plane and testing.