Borrowing it
Nothing to install: this file belongs to SachinGawande2003/Heuris-BioMCP. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.
curl -O https://raw.githubusercontent.com/SachinGawande2003/Heuris-BioMCP/master/CLAUDE.mdgit clone --depth 1 https://github.com/SachinGawande2003/Heuris-BioMCPWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/instructions/sachingawande2003/heuris-biomcp/claude-md)<a href="https://agentmods.dev/instructions/sachingawande2003/heuris-biomcp/claude-md"><img src="https://agentmods.dev/badge/instructions/sachingawande2003/heuris-biomcp/claude-md/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/instructions/sachingawande2003/heuris-biomcp/claude-md"><img src="https://agentmods.dev/badge/instructions/sachingawande2003/heuris-biomcp/claude-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00988 | $0.00988 |
| Opus 5 | $0.00494 | $0.00494 |
| Sonnet 5 | $0.00198 | $0.00198 |
| Haiku 4.5 | $0.00099 | $0.00099 |
Grade A, and why
Heuris-BioMCP CLAUDE.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 110 lines — stays where its author put it; the contents beside it link to each section on GitHub.
Heuris-BioMCP Agent Guidance
What this server is for
Heuris-BioMCP exposes a curated bioinformatics MCP surface for literature review, gene and protein lookup, pathway analysis, translational research, CRISPR planning, variant interpretation, and biomedical strategy workflows.
The public tool list is intentionally curated. Prefer the higher-level workflow tools when they match the task instead of stitching together many low-level calls.
Recommended workflows
Literature and mechanism grounding
Start with:
search_pubmedfor the evidence baseget_gene_infofor canonical gene contextget_protein_infoorfind_proteinfor protein-level detailpathway_analysisfor pathway and mechanism context
Translational gene review
Use:
multi_omics_gene_reportfor a broad cross-database synthesissearch_cbio_mutationsfor cancer mutation contextsearch_gwas_catalogfor trait associationsget_gene_disease_associationsfor disease links
Protein structure work
Use:
find_proteinto resolve a protein or accessionget_alphafold_structurefor public structure modelspredict_structure_boltz2only when NVIDIA credentials are configuredprotein_binding_pocketorstructural_similarityfor follow-on structure analysis
CRISPR design and review
Use:
crispr_analysiswithaction="design"for guide designcrispr_analysiswithaction="off_target"for off-target reviewcrispr_analysiswithaction="repair"for repair template workflows
Variant interpretation
Use:
variant_analysiswithaction="full_report"for a full interpretation passvariant_analysiswithaction="clinvar"oraction="population_frequency"for narrow follow-upsrare_disease_diagnosiswhen the entry point is phenotype-first rather than variant-first
Drug and biomarker work
Use:
get_drug_targetsandfind_repurposing_candidatesfor target and repurposing ideasdrug_interaction_checkerfor interaction checksdrug_safetyfor safety and labeling workflowsbiomarker_panel_designandpharmacogenomics_reportfor translational planning
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 11d ago First seen · 110 lines · 988 tokens per session scan A 398dd68e3e6a
Heuris-BioMCP CLAUDE.md is an instructions file published in the GitHub repository SachinGawande2003/Heuris-BioMCP (1 stars, last pushed 5mo ago), licensed MIT. It adds 988 tokens to every session, about $0.0049 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.
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