ShangBioLab

33 mods across 1 repository, 11 stars between them.

spatial-targets

25

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Python API skill for exploratory spatial biomarker discovery, target prioritization, drug annotation, and research-use evidence summaries.

not rated 11 4mo ago A 28 tokens original Apache-2.0

spatial-tls

26

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Python API skill for tertiary lymphoid structure detection, maturity typing, ecosystem analysis, and exploratory outcome association.

not rated 11 4mo ago A 26 tokens original Apache-2.0

spatial-trajectory

27

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Trajectory inference and pseudotime analysis for spatial transcriptomics data.

not rated 11 4mo ago A 18 tokens original Apache-2.0

spatial-translation

28

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Python API skill for cross-modal spatial translation, including histology-to-expression prediction and super-resolution helpers.

not rated 11 4mo ago A 25 tokens original Apache-2.0

spatial-velocity

29

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

RNA velocity and cellular dynamics analysis for spatial transcriptomics data.

not rated 11 4mo ago A 17 tokens original Apache-2.0

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Generic visualization for spatial transcriptomics data — creates spatial feature maps, UMAP/PCA plots, and downstream result visualizations for domains, annotation, deconvolution, communication, statistics, trajectory, and integration.

not rated 11 4mo ago A 48 tokens original Apache-2.0

spatial-wsi

31

ShangBioLab/SpatialClaw

Skill Claude CodeCodex

Python API skill for whole-slide image loading, tiling, feature extraction, and optional multiple-instance learning inference.

not rated 11 4mo ago A 27 tokens original Apache-2.0

At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: