cobrapy
97Skill Claude Code
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
Skill Claude Code
Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.
Skill Claude CodeCodex
Simplifies code for clarity. Use when refactoring code for clarity without changing behavior. Use when code works but is harder to read, maintain, or extend than it should be. Use when reviewing code that has accumulated unnecessary complexity.
Skill Claude CodeCodex
Create CodeTour .tour files — persona-targeted, step-by-step walkthroughs with real file and line anchors. Use for onboarding tours, architecture walkthroughs, PR tours, RCA tours, and structured "explain how this works" requests. Use when the user asks for a code tour, onboarding walkthrough, PR tour, or an…
Skill Claude CodeCodex
Analyze an unfamiliar codebase and generate a structured onboarding guide with architecture map, key entry points, conventions, and a starter CLAUDE.md. Use when joining a new project or setting up Claude Code for the first time in a repo.
Skill Claude CodeCodex
Real-time structural Code Health via CodeScene MCP — review before edits, verify score deltas after changes, gate commits and PRs. Use when reviewing code quality, refactoring, checking if AI changes degraded a file, or before commit/PR.
Skill Claude CodeCodex
Baseline cross-project coding conventions for naming, readability, immutability, and code-quality review. Use detailed frontend or backend skills for framework-specific patterns. Use when reviewing code quality or naming with no framework-specific skill that applies.
Skill Claude CodeCodex
Use when multiple consumers and providers must evolve an API or event schema without field drift, integration surprises, or one side silently redefining the interface.
Skill Claude CodeCodex
Track and report Claude Code token usage, spending, and budgets from the local ECC cost-tracker metrics log. Use when the user asks about costs, spending, usage, tokens, budgets, or cost breakdowns by model, session, or date.
Skill Claude CodeCodex needs its repo
Add one optional external Codex critique after the existing council has produced a decision draft. Use when an ambiguous, high-consequence decision would benefit from a separate model invocation's attempt to break the synthesis. Requires explicit consent before sending the compact draft and disagreement to OpenAI…
Skill Claude CodeCodex
C++ coding standards based on the C++ Core Guidelines (isocpp.github.io). Use when writing, reviewing, or refactoring C++ code to enforce modern, safe, and idiomatic practices.
Skill Claude CodeCodex
C++ coding standards based on the C++ Core Guidelines (isocpp.github.io). Use when writing, reviewing, or refactoring C++ code to enforce modern, safe, and idiomatic practices.
Skill Claude CodeCodex
Use only when writing/updating/fixing C++ tests, configuring GoogleTest/CTest, diagnosing failing or flaky tests, or adding coverage/sanitizers.
Skill Claude CodeCodex
Use only when writing/updating/fixing C++ tests, configuring GoogleTest/CTest, diagnosing failing or flaky tests, or adding coverage/sanitizers.
Skill Claude CodeCodex
C# and .NET testing patterns with xUnit, FluentAssertions, mocking, integration tests, and test organization best practices. Use when writing or reviewing xUnit tests, mocks, or integration tests in a C# / .NET project.
Skill Claude CodeCodex
Production-ready Dart and Flutter patterns covering null safety, immutable state, async composition, widget architecture, popular state management frameworks (BLoC, Riverpod, Provider), GoRouter navigation, Dio networking, Freezed code generation, and clean architecture. Use when writing or reviewing Dart and Flutter…
Skill Claude Code
Query documented public database APIs with explicit endpoints, filters, pagination, and provenance. Use when a scientific, regulatory, financial, or other database-backed fact must be retrieved reproducibly from a named source rather than inferred from general knowledge.
Skill Claude CodeCodex
Database migration best practices for schema changes, data migrations, rollbacks, and zero-downtime deployments across PostgreSQL, MySQL, and common ORMs (Prisma, Drizzle, Kysely, Django, TypeORM, golang-migrate). Use when writing a schema or data migration, planning a rollback, or aiming for zero-downtime deployment.
Skill Claude CodeCodex
Database migration best practices for schema changes, data migrations, rollbacks, and zero-downtime deployments across PostgreSQL, MySQL, and common ORMs (Prisma, Drizzle, Django, TypeORM, golang-migrate). Use when planning or implementing database schema changes.
Skill Claude Code
Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters…
Skill Claude CodeCodex
Guides systematic root-cause debugging. Use when tests fail, builds break, behavior doesn't match expectations, or you encounter any unexpected error. Use when you need a systematic approach to finding and fixing the root cause rather than guessing.
Skill Claude CodeCodex
Security checklist for Solidity AMM contracts, liquidity pools, and swap flows. Covers reentrancy, CEI ordering, donation or inflation attacks, oracle manipulation, slippage, admin controls, and integer math. Use when auditing or writing Solidity AMM, liquidity pool, or swap code.
Skill Claude CodeCodex needs its repo
Deployment workflows, CI/CD pipeline patterns, Docker containerization, health checks, rollback strategies, and production readiness checklists for web applications. Use when setting up CI/CD, containerizing an app, or checking production readiness before a release.
Skill Claude CodeCodex needs its repo
Deployment workflows, CI/CD pipeline patterns, Docker containerization, health checks, rollback strategies, and production readiness checklists for web applications. Use when setting up deployment infrastructure or planning releases.
Skill Claude CodeCodex
Manages deprecation and migration. Use when removing old systems, APIs, or features. Use when migrating users from one implementation to another. Use when deciding whether to maintain or sunset existing code.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: