thesis-format-manuscript

thesis-format-manuscript is a command for Claude Code from idoforgod/Dissertation-Simulator-AgenticWorkflow. It costs 20 tokens per session (137 once invoked), scanned A, original, MIT.

A formatting step that adapts a thesis for submission to a specific academic journal. It applies the journal's rules to the text, references, headings, tables, figures, and submission materials.

In plain words
What is it for?
Use it to reformat a manuscript, adjust citations and structure, check word or page limits, prepare a cover-letter template, and create a submission checklist.
Why use it?
It reduces the manual work of matching a thesis to a journal's style and submission requirements. It also makes missing requirements easier to spot before submission.

Command for Claude Code

Written for Claude Code: installed under .claude/.

Good fit Use it to reformat a manuscript, adjust citations and structure, check word or page limits, prepare a cover-letter template, and create a submission checklist.

Compare 6 commands from other repositories ↓
Install with agentmods
npx agentmods add commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript
Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

Clone the repo
git clone --depth 1 https://github.com/idoforgod/Dissertation-Simulator-AgenticWorkflow

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for thesis-format-manuscript

README.md
[![agentmods](https://agentmods.dev/badge/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript/github.svg)](https://agentmods.dev/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript)
Your own site
<a href="https://agentmods.dev/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript"><img src="https://agentmods.dev/badge/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for thesis-format-manuscript

Your own site · 80×15
<a href="https://agentmods.dev/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript"><img src="https://agentmods.dev/badge/commands/idoforgod/dissertation-simulator-agenticworkflow/thesis-format-manuscript.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 20 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 137 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00020 $0.00137
Opus 5.5 $0.00008 $0.00055
Sonnet 5.5 $0.00004 $0.00027
Haiku 4.5 $0.00002 $0.00014

Measured 1mo ago against content hash 29e035ac4f15, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

thesis-format-manuscript scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude/commands/thesis-format-manuscript.md · 21 lines

What it actually says

Format Manuscript

Convert thesis to journal submission format.

Protocol

  1. Read thesis draft and target journal from SOT
  2. Delegate to @manuscript-formatter:
    • Apply target journal's style guide
    • Reformat citations and references
    • Adjust heading levels and structure
    • Format tables and figures per journal requirements
    • Prepare cover letter template
    • Check word/page limits
  3. Output formatted manuscript to thesis-output/{project}/submission/
  4. Generate submission checklist with journal-specific requirements
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 1mo ago First seen · 21 lines · 20 tokens per session scan A 29e035ac4f15

Subscribe to this mod's changes

thesis-format-manuscript is a command published in the GitHub repository idoforgod/Dissertation-Simulator-AgenticWorkflow (108 stars, last pushed 4mo ago), licensed MIT. It adds 20 tokens to every session and 137 once invoked, about $0.0001 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-09-03.

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