process-research-integration

process-research-integration is a command for Claude Code from Jamie-BitFlight/claude_skills. It costs 32 tokens per session (846 once invoked), scanned A, original, MIT.

A command that reviews research Markdown files and adds sections describing how each file could connect to existing skills, agents, and plugins. Markdown is a plain-text document format commonly used for project notes.

In plain words
What is it for?
Use it to process all research files, one category, or one file, with options to reprocess existing sections or preview what would be handled without changing files.
Why use it?
It avoids checking every research file manually for possible connections to the rest of the repository.

Command for Claude Code

Written for Claude Code: installed under .claude/. Also seen: reads .claude/ paths.

Needs its repository: it runs a file that does not travel with it, so clone the repository first. The line is uv run ./scripts/process-research-integration.py --help.

Good fit Use it to process all research files, one category, or one file, with options to reprocess existing sections or preview what would be handled without changing files.

Compare 6 commands from other repositories ↓
Install

Getting it into your agent

It runs from inside its repository, so the clone comes first — what it calls does not travel with the file alone.

Clone the repo
git clone --depth 1 https://github.com/Jamie-BitFlight/claude_skills
agentmods
npx agentmods add commands/jamie-bitflight/claude_skills/process-research-integration

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for process-research-integration

README.md
[![agentmods](https://agentmods.dev/badge/commands/jamie-bitflight/claude_skills/process-research-integration.svg)](https://agentmods.dev/commands/jamie-bitflight/claude_skills/process-research-integration)
Your own site
<a href="https://agentmods.dev/commands/jamie-bitflight/claude_skills/process-research-integration"><img src="https://agentmods.dev/badge/commands/jamie-bitflight/claude_skills/process-research-integration.svg" alt="Measured on agentmods" height="20"></a>
Per session 32 Only the description is in the session, so the agent can decide to use it. The body loads when it is invoked.
When invoked 846 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00032 $0.00846
Opus 5 $0.00016 $0.00423
Sonnet 5 $0.00006 $0.00169
Haiku 4.5 $0.00003 $0.00085

Measured 8d ago against content hash d965c1aa8ef2, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-08, from the pricing page.

Security

Grade A, and why

process-research-integration scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

.claude/commands/process-research-integration.md · 139 lines

How it starts

The opening of the file, as written. The whole thing — 139 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Process Research Integration Opportunities

Batch process all research markdown files to discover and document integration opportunities with existing repository capabilities.


What This Does

  1. Finds all markdown files in research/ (excluding README.md files)
  2. For each research file, spawns the research-context-agent
  3. Agent reads the file, searches for connections, appends Integration Opportunities section
  4. Reports summary of all processed files

Usage

/process-research-integration

Options:

# Process a specific category
/process-research-integration --category developer-tools

# Process a single file
/process-research-integration --file research/developer-tools/loguru.md

# Force reprocess (replace existing Integration Opportunities)
/process-research-integration --force

# Dry run (show what would be processed without making changes)
/process-research-integration --dry-run

Implementation

This command uses the batch processing script at ./scripts/process-research-integration.py.

Script Features:

  • Cross-platform Python script using uv with inline script metadata
  • CLI built with Typer for command-line options
  • Rich console output for progress tracking and results visualization
  • Supports category filtering, single file processing, force reprocessing, and dry-run mode

For manual invocation:

# Using uv (recommended - handles dependencies automatically)
uv run ./scripts/process-research-integration.py --help

# Or make executable and run directly
chmod +x ./scripts/process-research-integration.py
./scripts/process-research-integration.py --help

Processing workflow:

  1. Find research files matching criteria (category/file/all)
  2. For each file, spawn research-context-agent via Agent tool
  3. Agent reads, analyzes, validates with WebSearch, appends Integration Opportunities
  4. Track and display results in formatted tables

Agent orchestration (to be implemented):

  • Use Agent tool to spawn research-context-agent instances
  • Pass file path as parameter
  • Sequential processing (one file at a time)
  • Collect results and generate summary

Read the full file on GitHub · 139 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 8d ago First seen · 139 lines · 32 tokens per session scan A d965c1aa8ef2

Subscribe to this mod's changes

process-research-integration is a command published in the GitHub repository Jamie-BitFlight/claude_skills (66 stars, last pushed today), licensed MIT. It adds 32 tokens to every session and 846 once invoked, about $0.0002 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.