Cortex: Instructions file for Claude Code

CLAUDE.md

Cortex CLAUDE.md is an instructions file for Claude Code from cdeust/Cortex. It costs 406 tokens per session, scanned A, original, MIT.

Development instructions for Cortex, a persistent-memory server for Claude Code that stores session information and builds domain profiles. They cover its Python implementation, storage options, testing, architecture, and releases.

In plain words
What is it for?
Use them when developing Cortex, choosing SQLite or PostgreSQL with vector search, running tests, checking installation behavior, or preparing releases.
Why use it?
They preserve useful context between sessions and give contributors a consistent way to build and verify changes to the memory system.

Instructions file for Claude Code

Written for Claude Code: the file is CLAUDE.md. Also seen: mentions Claude Code; mentions Codex.

This is cdeust/Cortex's own configuration. It tells Claude Code how to work on Cortex itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything Cortex configures →

Reuse

Borrowing it

Nothing to install: this file belongs to cdeust/Cortex. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/cdeust/Cortex/main/CLAUDE.md
Clone the repo
git clone --depth 1 https://github.com/cdeust/Cortex

Made for: Claude Code.

Wrote this? Show the measurements

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Per session 406 This file is loaded in full into every session.
When invoked 406 The same file — it is already loaded in full.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.00406 $0.00406
Opus 5.5 $0.00162 $0.00162
Sonnet 5.5 $0.00081 $0.00081
Haiku 4.5 $0.00041 $0.00041

Measured 28d ago against content hash a0c8c7fbc5c6, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

Cortex CLAUDE.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 28d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

CLAUDE.md · 31 lines

What it actually says

Cortex — Persistent Memory MCP Server

Persistent memory and cognitive profiling MCP server for Claude Code. Python 3.10+, FastMCP, Pydantic, numpy; SQLite by default, PostgreSQL+pgvector opt-in (PRIVACY.md).

This file is deliberately short: the host harness (hooks, skills, agents) loads what it needs on demand. Everything that used to be here is in docs/agent-guidance.md (architecture pointers, releasing, code style and the craftsmanship gate, what not to do, the zetetic implementation standard). Read it before any non-trivial change.

Build & Test

  • Install (dev): uv sync --no-default-groups --extra dev (add --extra sqlite for the SQLite backend). Resolve from uv.lock, never from the pyproject.toml ranges (issue #253).
  • Preflight: python -m mcp_server.doctor
  • Tests: pytest · one layer: pytest tests_py/core/
  • Lint before every commit: ruff check && ruff format --check (CI enforces both).
  • Type gate: CONTRIBUTING.md § Reproducing the pyright gate locally.
  • Craftsmanship gate: python scripts/check_craftsmanship.py (300 lines per file, 40 per method, layer whitelist, # source: on every constant).
  • Release-gate benchmarks: benchmarks/reproduce.sh, never against the live database.

Non-negotiables

  • Layers: server → handlers → core ← shared, infrastructure → shared; handlers are the only composition roots.
  • Every git worktree lives at .claude/worktrees/<name>/ (.Codex/worktrees/<name>/ for Codex), never outside the repo.
  • No source, no implementation; benchmark before commit; no silent fallbacks or compatibility shims.
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 28d ago Changed · +1 lines · +16 tokens per session a0c8c7fbc5c6
  2. 1mo ago Changed · -140 lines · -2,079 tokens per session 02def822dbf3
  3. 1mo ago First seen · 170 lines · 2,469 tokens per session scan A 72d5a225331a

Subscribe to this mod's changes

Cortex CLAUDE.md is an instructions file published in the GitHub repository cdeust/Cortex (75 stars, last pushed today), licensed MIT. It adds 406 tokens to every session, about $0.0016 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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