AgenticResearchWiki: Instructions file for Codex

Reading docs

This repo is a documentation repo that records everything about this research project: background, goals, methods, experiments, paths, data, etc. Links between docs use wiki-style [[ ]] syntax. When you need to answer questions, make changes, or update project docs for this research project, first gather the necessary information from this wiki.

Reading order

1. [[Overview]] — project background, goals, methods, task navigation, experimental side tracks
2. Pick based on task type:
   • Data task -> [[DataOverview]]
   • Training task -> [[TrainingOverview]]
   • Eval task -> [[EvalOverview]] Read the docs selectively and hierarchically based on my task.

Do NOT read by default

• Historical docs under **/Archived/
• Abandoned track docs under ExperimentalTracks/abandoned/, unless the task explicitly asks to "review / post-mortem an abandoned plan"
• Long experiment logs, unless the current task explicitly requires tracing back
• ResearchNotes/ holds background research, comparison, and notes-style docs. These are primarily for human understanding and decision-making and are NOT default task entry points. Only when the task explicitly asks for "research / comparison / reviewing the decision rationale", enter via [[ResearchNotesOverview]] and read on demand.

Template placeholders

{{...}} in docs are unfilled template fields (the text inside the braces is a fill hint). Do not treat them as real content or base any judgment on them. When you see one:

• If the task needs the real value of that field: ask the user first, then fill it in and remove the braces after they reply;
• If the task is to fill in the doc: generate content following the hint inside the braces, replacing the entire {{...}};
• When writing records back / tidying docs: do not keep or add new {{...}}, unless it's deliberately left as a placeholder for the user.

Doc-update rules

Invoke the corresponding doc-update skill.