What is medical-graphrag-assistant CLAUDE.md?

A project instruction file for a medical graph-and-search assistant built with Python, Streamlit, and InterSystems IRIS. It records the project's technologies, structure, commands, and rules for commit messages.

Use it when developing, reviewing, or committing changes to the medical-graphrag-assistant project, especially its medical data, FHIR, database, and user-interface features.

It gives a coding agent project-specific guidance instead of relying on general assumptions. It also helps keep authorship and commit messages consistent with the project's stated policy.

How intersystems-community/medical-graphrag-assistant configures Claud

Reuse

Borrowing it

Nothing to install: this file belongs to intersystems-community/medical-graphrag-assistant. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file

curl -O https://raw.githubusercontent.com/intersystems-community/medical-graphrag-assistant/main/CLAUDE.md

Clone the repo

git clone --depth 1 https://github.com/intersystems-community/medical-graphrag-assistant

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/instructions/intersystems-community/medical-graphrag-assistant/claude-md/github.svg)](https://agentmods.dev/instructions/intersystems-community/medical-graphrag-assistant/claude-md)

Your own site

<a href="https://agentmods.dev/instructions/intersystems-community/medical-graphrag-assistant/claude-md"><img src="https://agentmods.dev/badge/instructions/intersystems-community/medical-graphrag-assistant/claude-md/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

Your own site · 80×15

<a href="https://agentmods.dev/instructions/intersystems-community/medical-graphrag-assistant/claude-md"><img src="https://agentmods.dev/badge/instructions/intersystems-community/medical-graphrag-assistant/claude-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>

Per session 990 This file is loaded in full into every session.

When invoked 990 The same file — it is already loaded in full.

Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.

Origin original No closer match found in the catalogue.

Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

Model	Per session	Once invoked
Fable 5.1	$0.00990	$0.00990
Opus 5	$0.00495	$0.00495
Sonnet 5	$0.00198	$0.00198
Haiku 4.5	$0.00099	$0.00099

Measured 8d ago against content hash dac3ebe6c862, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-09, from the pricing page.

Security

Grade A, and why

medical-graphrag-assistant CLAUDE.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 8d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

CLAUDE.md · 112 lines

How it starts

The opening of the file, as written. The whole thing — 112 lines — stays where its author put it; the contents beside it link to each section on GitHub.

medical-graphrag-assistant Development Guidelines

Auto-generated from all feature plans. Last updated: 2025-12-17

ABSOLUTE RULE: NO AI ATTRIBUTION

CRITICAL: All commits in this project are authored by Thomas Dyar ONLY.

NEVER include in commit messages:

Co-Authored-By: Claude or any AI name
Generated with [Claude Code] or similar
Emoji markers suggesting AI involvement
Links to AI tools

Commit message format:

Brief description of change

Optional extended description.

This rule is non-negotiable. See .specify/memory/constitution.md Section I for full policy.

Active Technologies

Python 3.11 + Streamlit, streamlit-agraph, Plotly (fallback) (005-graphrag-details-panel)
InterSystems IRIS (existing - no changes required) (005-graphrag-details-panel)
Python 3.11 + MCP SDK, InterSystems IRIS DB-API, boto3 (AWS Bedrock), Synthea (patient generation) (007-fhir-radiology-integration)
InterSystems IRIS for Health (FHIR repository + vector tables) (007-fhir-radiology-integration)
Python 3.11 + MCP SDK, InterSystems IRIS DB-API, requests (FHIR REST), boto3 (Bedrock) (007-fhir-radiology-integration)
InterSystems IRIS for Health (FHIR R4 repository + VectorSearch tables) (007-fhir-radiology-integration)
TypeScript/JavaScript (Playwright MCP), Python 3.11 (target application) + @playwright/mcp (MCP server), Claude Code (execution host) (002-playwright-ux-tests)

Project Structure

src/
tests/

Commands

cd src [ONLY COMMANDS FOR ACTIVE TECHNOLOGIES][ONLY COMMANDS FOR ACTIVE TECHNOLOGIES] pytest [ONLY COMMANDS FOR ACTIVE TECHNOLOGIES][ONLY COMMANDS FOR ACTIVE TECHNOLOGIES] ruff check .

Code Style

TypeScript/JavaScript (Playwright MCP), Python 3.11 (target application): Follow standard conventions

Recent Changes

007-fhir-radiology-integration: Added Python 3.11 + MCP SDK, InterSystems IRIS DB-API, requests (FHIR REST), boto3 (Bedrock)
007-fhir-radiology-integration: Added Python 3.11 + MCP SDK, InterSystems IRIS DB-API, requests (FHIR REST), boto3 (Bedrock)
007-fhir-radiology-integration: Added Python 3.11 + MCP SDK, InterSystems IRIS DB-API, boto3 (AWS Bedrock), Synthea (patient generation)

Read the full file on GitHub · 112 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

8d ago First seen · 112 lines · 990 tokens per session scan A dac3ebe6c862

Subscribe to this mod's changes

medical-graphrag-assistant CLAUDE.md is an instructions file published in the GitHub repository intersystems-community/medical-graphrag-assistant (0 stars, last pushed 7mo ago), licensed MIT. It adds 990 tokens to every session, about $0.0049 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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