repo-graph: Instructions file for Claude Code

CLAUDE.md

repo-graph CLAUDE.md is an instructions file for Claude Code from James-Chahwan/repo-graph. It costs 4,402 tokens per session, scanned E, original, MIT.

A codebase-graph server that maps how files and parts of a software project connect. It provides tools to orient yourself, find code, trace links, inspect impact, read files, and refresh the map.

In plain words
What is it for?
Use it to explore a repository, find related code, trace behavior across layers, estimate change impact, inspect files, and refresh the project map.
Why use it?
It helps an assistant understand an unfamiliar repository and see what may be affected by a change. The underlying engine also identifies file locations and possible dead code.

Instructions file for Claude Code

Written for Claude Code: the file is CLAUDE.md. Also seen: mentions CLAUDE.md; mentions Claude Code.

This is James-Chahwan/repo-graph's own configuration. It tells Claude Code how to work on repo-graph itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything repo-graph configures →

Not installable: its command points at a path on the author’s own machine, so it runs nowhere else. The line is /home/ivy/Code/glia.

Reuse

Borrowing it

Nothing to install: this file belongs to James-Chahwan/repo-graph. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/James-Chahwan/repo-graph/main/CLAUDE.md
Clone the repo
git clone --depth 1 https://github.com/James-Chahwan/repo-graph

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

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README.md
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Your own site
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Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

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Your own site · 80×15
<a href="https://agentmods.dev/instructions/james-chahwan/repo-graph/claude-md"><img src="https://agentmods.dev/badge/instructions/james-chahwan/repo-graph/claude-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 4,402 This file is loaded in full into every session.
When invoked 4,402 The same file — it is already loaded in full.
Security scan E 3 findings. A grade says what 26 rules found in the file — not that it is safe. ✓ AI security review Sonnet 5 · 7 Sept 2026 📄 Read the review
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.04402 $0.04402
Opus 5.5 $0.01761 $0.01761
Sonnet 5.5 $0.00880 $0.00880
Haiku 4.5 $0.00440 $0.00440

Measured 22d ago against content hash 2ee44a247a22, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade E, and why

repo-graph CLAUDE.md scanned grade E with 3 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 22d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Downloads and executes remote codehighSupply chain

curl | sh runs whatever the server returns today, which is not necessarily what it returned when this was reviewed.

# curl -s https://pypi.org/pypi/glia-py/json | python -c "import sys,json;[print(f['filename']) for f in json.load(sys.stdin)['urls']]"

Recursive force deletehighDestructive command

rm -rf with a variable or a broad path is one typo away from removing the wrong tree.

rm -rf dist/ && python -m build

Makes network callslowCapability

Not a fault in itself. Listed so you know the mod talks to something, and to what.

# curl -s https://pypi.org/pypi/glia-py/json | python -c "import sys,json;[print(f['filename']) for f in json.load(sys.stdin)['urls']]"
CLAUDE.md · 203 lines

How it starts

The opening of the file, as written. The whole thing — 203 lines — stays where its author put it; the contents beside it link to each section on GitHub.

CLAUDE.md

This file provides guidance to Claude Code (claude.ai/code) when working with code in this repository.

What This Is

A thin Python MCP server that wraps the glia Rust engine (crate glia-py, PyPI glia-py). It exposes 6 MCP tools — orient, find, impact, trace, read, refresh — over any codebase. Each is a natural verb backed by an engine primitive (v0.5.0: find, blast_radius, cross_stack_trace, resolve, entry_flows, coverage, governing_docs), so the wrapper stays thin — the engine owns lookup, traversal, ranking, file/line locating, and the live (dead-code) flag.

The Python side is ~900 lines across 4 files. All parsing, graph building, storage (.gmap), activation, ranking, locating, and liveness happen in Rust. The Python package only hosts the MCP server, the CLI entrypoints, and a thin wrapper over the pyo3 bindings.

Commands

# Install (editable, for development)
pip install -e .

# Run the MCP server (points at a target repo)
repo-graph --repo /path/to/target-repo

# Initialise a new target repo (writes .mcp.json + CLAUDE.md instructions + first graph)
repo-graph-init --repo /path/to/target-repo

Python 3.11+ required. Runtime deps: mcp[cli]>=2,<3 (2.x renamed FastMCP → MCPServer; ported in 0.5.1), glia-py==0.5.1 (glia pins consumers exactly per release), watchdog>=3.0,<7.

Cache reuse on cold start

The wrapper caches the graph at <repo>/.glia/graph/ (sharded .gmap files). Since glia 0.5.0 (LC.8) load_from_gmap(dir, repo_path) self-heals — it rebuilds a stale, old-format or missing layout itself and writes it back — so get_graph() has no is_stale pre-check any more:

  • load_from_gmap(default_gmap_dir(repo), repo) — serves the layout, rebuilding it in place if it can't.
  • ValueError → fall back to _build_graph() (a full generate + save_to_default).

generate is a pure build in 0.5.0: it writes no layout, so the explicit save_to_default in _build_graph is the only thing keeping the next cold start fast. Cache writes are best-effort: a read-only filesystem or perms error doesn't break the live graph.

Read the full file on GitHub · 203 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 22d ago Changed · +10 lines · +455 tokens per session 2ee44a247a22
  2. 1mo ago Changed · +17 lines · +706 tokens per session 986a810095c9
  3. 1mo ago Changed · +2 lines · +76 tokens per session 5f91cd4d29a3
  4. 1mo ago First seen · 174 lines · 3,165 tokens per session scan E d40fcd599460

Subscribe to this mod's changes

repo-graph CLAUDE.md is an instructions file published in the GitHub repository James-Chahwan/repo-graph (87 stars, last pushed 23d ago), licensed MIT. It adds 4,402 tokens to every session, about $0.0176 per session on Opus 5.5. A static security scan graded it E with 3 findings (downloads and executes remote code, recursive force delete, makes network calls). No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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