archilles AGENTS.md

archilles AGENTS.md is an instructions file for Codex, OpenCode from kasssandr/archilles. It costs 1,256 tokens per session, scanned A, original, MIT.

Agent instructions for Archilles, a local search system for Calibre e-book libraries. They describe its commands, coding conventions, and current limitation that Codex cannot use its local MCP server.

In plain words
What is it for?
Guiding installation, book indexing, searches, checks, and other changes to Archilles.
Why use it?
They prevent incorrect setup or assumptions when an agent works on the repository.

Instructions file for CodexOpenCode

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add instructions/kasssandr/archilles/agents-md
Clone the repo
git clone --depth 1 https://github.com/kasssandr/archilles

Made for: Codex, OpenCode.

Wrote this? Show the measurements

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README.md
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When invoked 1,256 The same file — it is already loaded in full.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5 $0.01256 $0.01256
Opus 5 $0.00628 $0.00628
Sonnet 5 $0.00251 $0.00251
Haiku 4.5 $0.00126 $0.00126

Measured 5d ago against content hash 8804deaa9933, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

archilles AGENTS.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 5d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

AGENTS.md · 119 lines

How it starts

The opening of the file, as written. The whole thing — 119 lines — stays where its author put it; the contents beside it link to each section on GitHub.

AGENTS.md

This file provides guidance to Codex when working with code in this repository.

Project Overview

ARCHILLES is a privacy-first, local-first RAG (Retrieval-Augmented Generation) system for semantic search across Calibre e-book libraries. It provides hybrid vector+BM25 search with academic-grade citations, MCP integration for Claude Desktop; it will provide MCP integration for other LLMs soon, and finally a Streamlit web UI.

Note for Codex: ARCHILLES cannot currently be consumed via MCP from Codex — local MCP servers are not supported there. If that policy changes, wiring it up is worth a new attempt.

Commands

Installation

pip install -r requirements.txt

Indexing

python scripts/rag_demo.py index "/path/to/book.pdf" --book-id "AuthorName"
python scripts/batch_index.py --tag "Your-Tag" [--dry-run] [--skip-existing]

Searching

python scripts/rag_demo.py query "search term" [--mode hybrid|semantic|keyword]
python scripts/rag_demo.py query "text" --language de --tag-filter History
python scripts/rag_demo.py stats
python scripts/rag_demo.py list-indexed

Web UI

python scripts/web_ui.py

MCP Server (Claude Desktop)

python mcp_server.py

Code Quality

black src/ scripts/    # formatting
flake8 src/ scripts/   # linting
pytest                 # tests

Architecture

The system follows a layered pipeline:

Calibre Library (read-only SQLite)
    ↓
Extractors (PDF/EPUB/TXT/HTML/MOBI/DJVU/OCR)
    ↓
Modular Pipeline: ParserRegistry → ChunkerRegistry → EmbedderRegistry
    ↓
LanceDB (hybrid: dense vectors + BM25 FTS)
    ↓
Retriever (RRF fusion + optional cross-encoder reranking)
    ↓
ArchillesService (central facade)
    ↓
Consumers: MCP Server | Web UI (Streamlit) | CLI

Key Modules

  • src/calibre_db.py — Read-only access to Calibre's metadata.db (SQLite). This is an absolute boundary: never write to the Calibre library.
  • src/extractors/ — Format-specific extractors. PDF uses PyMuPDF primary with pdfplumber fallback. EPUB uses ebooklib with TOC-based section classification.
  • src/archilles/pipeline.pyModularPipeline orchestrates Parser → Chunker → Embedder using registry-based components.
  • src/storage/lancedb_store.py — LanceDB backend. Stores 1024-dim BGE-M3 vectors with rich metadata. Two tables: chunks (main content) and annotations (user highlights/notes).
  • src/service/archilles_service.py — Single facade used by MCP server, web UI, and CLI. Start here when adding new features.
  • src/calibre_mcp/server.py — MCP server exposing 10 tools (search, metadata, citations, annotations, stats). Carefully manages stdout/stderr to avoid JSON-RPC protocol corruption.
  • mcp_server.py — Entry point for Claude Desktop MCP integration.
  • scripts/rag_demo.py — Primary CLI (2,479 lines). Index, query, stats, list-indexed.

Read the full file on GitHub · 119 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 5d ago First seen · 119 lines · 1,256 tokens per session scan A 8804deaa9933

Subscribe to this mod's changes

archilles AGENTS.md is an instructions file published in the GitHub repository kasssandr/archilles (8 stars, last pushed today), licensed MIT. It adds 1,256 tokens to every session, about $0.0063 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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