clinpharm-pmx-skills: Instructions file for Codex

AGENTS.md

clinpharm-pmx-skills AGENTS.md is an instructions file for Codex, OpenCode from malekokour/clinpharm-pmx-skills. It costs 1,495 tokens per session, scanned A, original, MIT.

A collection of portable AI-agent skills for clinical pharmacology and pharmacometrics, the study of how medicines work in people and how drug levels change.

In plain words
What is it for?
Use it to review study reports, protocols, briefing documents, label sections, and analysis results; reconcile evidence; and prepare findings.
Why use it?
It checks clinical documents and analysis outputs for inconsistencies while keeping final medical and regulatory decisions with people.

Instructions file for CodexOpenCode

Written for Codex and OpenCode: the file is AGENTS.md.

This is malekokour/clinpharm-pmx-skills's own configuration. It tells Codex and OpenCode how to work on clinpharm-pmx-skills itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything clinpharm-pmx-skills configures →

Reuse

Borrowing it

Nothing to install: this file belongs to malekokour/clinpharm-pmx-skills. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/malekokour/clinpharm-pmx-skills/main/AGENTS.md
Clone the repo
git clone --depth 1 https://github.com/malekokour/clinpharm-pmx-skills

Made for: Codex, OpenCode.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

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README.md
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Your own site
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Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

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<a href="https://agentmods.dev/instructions/malekokour/clinpharm-pmx-skills/agents-md"><img src="https://agentmods.dev/badge/instructions/malekokour/clinpharm-pmx-skills/agents-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 1,495 This file is loaded in full into every session.
When invoked 1,495 The same file — it is already loaded in full.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.01495 $0.01495
Opus 5 $0.00747 $0.00747
Sonnet 5 $0.00299 $0.00299
Haiku 4.5 $0.00150 $0.00150

Measured 11d ago against content hash dfde3739a225, method: parsed. Prices are Anthropic first-party input rates as of 2026-09-10, from the pricing page.

Security

Grade A, and why

clinpharm-pmx-skills AGENTS.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 11d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

AGENTS.md · 145 lines

How it starts

The opening of the file, as written. The whole thing — 145 lines — stays where its author put it; the contents beside it link to each section on GitHub.

ClinPharm PMx Skills contributor contract

Product

ClinPharm PMx Skills publishes portable Agent Skills for clinical pharmacology and pharmacometrics. A skill reviews a Clinical Study Report, protocol, briefing document, label section, or analysis output for internal inconsistencies and reports what it found.

Turn any AI agent into a clinical pharmacologist and pharmacometrician.

It reviews, reconciles, and prepares evidence. It never selects a dose, signs off, or submits.

The repository holds 151 packages — 151 released, 0 built at the 2026-08-13 collection-manifest snapshot (clinical pharmacology 133 · pharmacometrics 16 · utilities 2). Regenerate the tally from collections/*/collection.json before quoting it — this sentence is a dated snapshot, not a live value. See .github/GOVERNANCE.md.

Corrected 2026-08-13. This paragraph read "21 packages … one is released and twenty are built" — a 2026-08-11 snapshot that survived the expansion to 151. It is recorded rather than silently swapped because it shows how a hand-written count drifts: the sentence even carried the instruction to regenerate before quoting, and that instruction was not followed by the sentence containing it.

What released means here, precisely. The package exists, validates, and has passed the structural gates. It does not mean clinical validation. Three blocker-severity findings against the evaluation suite are open and frozen, so evaluation-gate qualification is explicitly incomplete — see CLAIM-LEDGER.md. Do not write "passes every gate": name the gate.

Skills work through ordinary chat attachments, project workspaces, and skill-aware tools.

The claim this repository defends

Every tool reports mechanical findings and states its denominator. None recommends a dose. None issues a clinical conclusion. Reporting that two documents disagree is not the same as deciding which one is right.

Read the full file on GitHub · 145 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 11d ago First seen · 145 lines · 1,495 tokens per session scan A dfde3739a225

Subscribe to this mod's changes

clinpharm-pmx-skills AGENTS.md is an instructions file published in the GitHub repository malekokour/clinpharm-pmx-skills (6 stars, last pushed 9d ago), licensed MIT. It adds 1,495 tokens to every session, about $0.0075 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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