Borrowing it
Nothing to install: this file belongs to monarch-initiative/dismech. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.
curl -O https://raw.githubusercontent.com/monarch-initiative/dismech/main/AGENTS.mdgit clone --depth 1 https://github.com/monarch-initiative/dismechWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/instructions/monarch-initiative/dismech/agents-md)<a href="https://agentmods.dev/instructions/monarch-initiative/dismech/agents-md"><img src="https://agentmods.dev/badge/instructions/monarch-initiative/dismech/agents-md/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/instructions/monarch-initiative/dismech/agents-md"><img src="https://agentmods.dev/badge/instructions/monarch-initiative/dismech/agents-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00262 | $0.00262 |
| Opus 5.5 | $0.00105 | $0.00105 |
| Sonnet 5.5 | $0.00052 | $0.00052 |
| Haiku 4.5 | $0.00026 | $0.00026 |
Grade A, and why
dismech AGENTS.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 1mo ago.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
What it actually says
Note that this repo is mostly geared around Claude Code.
You MUST read the full contents of @CLAUDE.md
Use the locally installed TypeSafe skill at
.claude/skills/typesafe-ai/SKILL.md when working on AI-powered features in
this project, following its live-documentation guidance for integrations.
For Codex and any other agent: never create or hand-edit references_cache/*.md.
Regenerate cache files with just fetch-reference <ID> instead.
For Codex and any other agent: cache/dataset_accessions.json is retired and
deleted. Never read, recreate, refresh, or restore it. If an old PR carries it,
keep its deletion when resolving conflicts; do not merge its contents. Dataset
accessions are verified by fetching them into references_cache/ (just verify-datasets <file>, which writes references_cache/GEO_<ID>.md); commit
that file instead. The shared blob was a single sorted JSON file that every
verifier run rewrote in full, so it collided between concurrent curation PRs.
For the rationale behind project scope, schema, ontology, BioLink/KGX, and evidence
decisions, consult the decision register at docs/explanation/design-decisions.md.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- 1mo ago Changed · +4 lines · +42 tokens per session 1e3162d858b4
- 1mo ago Changed · +1 lines · +11 tokens per session ed9c0730ee84
- 1mo ago Changed · +7 lines · +116 tokens per session 3188ee961212
- 1mo ago First seen · 10 lines · 93 tokens per session scan A d89da0fbe582
dismech AGENTS.md is an instructions file published in the GitHub repository monarch-initiative/dismech (69 stars, last pushed today), licensed BSD-3-Clause. It adds 262 tokens to every session, about $0.0010 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.
Other instructions, from other repositories
vscode buildNext.instructions.md
Working notes and architecture documentation for the new esbuild-based build system in build/next. Use when making changes to the new build pipeline (transpile/bundle commands, NLS plugin, source-map handling, resource copying, or self-hosting watch tasks).
next.js AGENTS.md
AGENTS.md instructions for vercel/next.js, covering next.js development guide, codebase structure, monorepo overview, core package: packages/next and other important packages.
vscode oss-third-party-notices.instructions.md
Instructions for microsoft/vscode, covering vs code oss third-party-notices pipeline, architecture, pipeline flow in ci, cache eligibility and rollout and applying the notice (cutover).
langchain AGENTS.md
AGENTS.md instructions for langchain-ai/langchain, covering global development guidelines for the langchain monorepo, corridor security analysis, project architecture and context, monorepo structure and development tools & commands.
vscode copilot-instructions.md
Copilot instructions for microsoft/vscode, covering vs code copilot instructions, project overview, root folders, core architecture (src/ folder) and built-in extensions (extensions/ folder).
deepseek-harness AGENTS.md
AGENTS.md instructions for deepseek-ai/deepseek-harness, covering agents.md, pre-stable apis and released session data, repository layout, commands and host sandbox failures.