protein-lab: Instructions file for Claude Code

CLAUDE.md

protein-lab CLAUDE.md is an instructions file for Claude Code from QINGMINGMIKU/protein-lab. It costs 13,851 tokens per session, scanned A, original, no licence file.

A set of Claude Code instructions for the protein-lab project. It documents the project, its environment, folder layout, and main design points.

In plain words
What is it for?
It helps with work on the protein-lab repository by explaining its setup, structure, and architecture.
Why use it?
It gives Claude Code project-specific guidance instead of leaving it to infer how the codebase is organised.

Instructions file for Claude Code

Written for Claude Code: the file is CLAUDE.md.

This is QINGMINGMIKU/protein-lab's own configuration. It tells Claude Code how to work on protein-lab itself, so it is not a mod to install elsewhere. Copy it as a starting point and replace the rules that are about this project. Everything protein-lab configures →

Reuse

Borrowing it

Nothing to install: this file belongs to QINGMINGMIKU/protein-lab. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file
curl -O https://raw.githubusercontent.com/QINGMINGMIKU/protein-lab/ReDesign/CLAUDE.md
Clone the repo
git clone --depth 1 https://github.com/QINGMINGMIKU/protein-lab

Made for: Claude Code.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for protein-lab CLAUDE.md

README.md
[![agentmods](https://agentmods.dev/badge/instructions/qingmingmiku/protein-lab/claude-md/github.svg)](https://agentmods.dev/instructions/qingmingmiku/protein-lab/claude-md)
Your own site
<a href="https://agentmods.dev/instructions/qingmingmiku/protein-lab/claude-md"><img src="https://agentmods.dev/badge/instructions/qingmingmiku/protein-lab/claude-md/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

agentmods 80×15 button for protein-lab CLAUDE.md

Your own site · 80×15
<a href="https://agentmods.dev/instructions/qingmingmiku/protein-lab/claude-md"><img src="https://agentmods.dev/badge/instructions/qingmingmiku/protein-lab/claude-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>
Per session 13,851 This file is loaded in full into every session.
When invoked 13,851 The same file — it is already loaded in full.
Security scan A 0 findings. A grade says what 26 rules found in the file — not that it is safe.
Origin unknown No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5.1 $0.13851 $0.13851
Opus 5.5 $0.05540 $0.05540
Sonnet 5.5 $0.02770 $0.02770
Haiku 4.5 $0.01385 $0.01385

Measured 13d ago against content hash 7592303d48a7, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade A, and why

protein-lab CLAUDE.md scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 13d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

CLAUDE.md · 182 lines

The source is not reproduced here

No licence file

A repository with no LICENSE is all rights reserved by default, so the body is not copied here. The metadata, the measurements and the link are.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 13d ago Changed · +4 lines · +630 tokens per session 7592303d48a7
  2. 1mo ago Changed · +73 tokens per session 9dd29e881e66
  3. 1mo ago Changed · +3 lines · +2,010 tokens per session 2a6b1c5ac595
  4. 1mo ago Changed · +28 lines · +2,560 tokens per session d910c447ba00
  5. 2mo ago First seen · 147 lines · 8,578 tokens per session scan A 8caded0dc36a

Subscribe to this mod's changes

protein-lab CLAUDE.md is an instructions file published in the GitHub repository QINGMINGMIKU/protein-lab (2 stars, last pushed 13d ago), with no licence file. It adds 13,851 tokens to every session, about $0.0554 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-31.

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