What is FastPLMs AGENTS.md?

An AGENTS.md instruction file for FastPLMs, a project that provides implementations of protein language models. It describes the project purpose, trusted sources, repository boundaries, and architectural rules.

Use it when an agent needs to understand or edit the FastPLMs repository.

It helps a coding agent make changes without violating the project’s structure or design rules.

How Synthyra/FastPLMs configures Codex and OpenCode

Reuse

Borrowing it

Nothing to install: this file belongs to Synthyra/FastPLMs. Take a copy, put it at the same path in your own repository, and replace the rules that are about this project with yours.

Copy the file

curl -O https://raw.githubusercontent.com/Synthyra/FastPLMs/main/AGENTS.md

Clone the repo

git clone --depth 1 https://github.com/Synthyra/FastPLMs

Made for: Codex, OpenCode.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

README.md

[![agentmods](https://agentmods.dev/badge/instructions/synthyra/fastplms/agents-md/github.svg)](https://agentmods.dev/instructions/synthyra/fastplms/agents-md)

Your own site

<a href="https://agentmods.dev/instructions/synthyra/fastplms/agents-md"><img src="https://agentmods.dev/badge/instructions/synthyra/fastplms/agents-md/github.svg" alt="Measured on agentmods" height="20"></a>

Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.

Your own site · 80×15

<a href="https://agentmods.dev/instructions/synthyra/fastplms/agents-md"><img src="https://agentmods.dev/badge/instructions/synthyra/fastplms/agents-md.svg" alt="Reviewed on agentmods" width="80" height="20"></a>

Per session 3,241 This file is loaded in full into every session.

When invoked 3,241 The same file — it is already loaded in full.

Security scan B 1 finding. A grade says what 26 rules found in the file — not that it is safe.

Origin unknown No closer match found in the catalogue.

Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

Model	Per session	Once invoked
Fable 5.1	$0.03241	$0.03241
Opus 5.5	$0.01296	$0.01296
Sonnet 5.5	$0.00648	$0.00648
Haiku 4.5	$0.00324	$0.00324

Measured 29d ago against content hash 1440e1d263ce, method: parsed. Prices are Anthropic first-party input rates as of 2026-10-07, from the pricing page.

Security

Grade B, and why

FastPLMs AGENTS.md scanned grade B with 1 finding against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 29d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Asks for rootmediumPrivilege escalation

A mod that escalates privileges can change anything on the machine, not only the project.

sudo docker buildx bake \

AGENTS.md · 298 lines

The source is not reproduced here

A licence we could not identify

The repository carries a LICENSE file, but it is custom or dual enough that GitHub cannot name it and neither can this catalogue. Unknown terms are not permission, so the body is not copied here. Read the licence at the source and decide for yourself.

Read it on GitHub

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

29d ago Changed · +27 lines · +266 tokens per session 1440e1d263ce
1mo ago Changed · -2 lines b22874d0f0fd
1mo ago Changed · +4 lines · +110 tokens per session 82a48f589062
1mo ago Changed · +46 lines · +638 tokens per session 6c7d25ba30a7
1mo ago Changed · +11 lines · +217 tokens per session f9d8045fa87d
2mo ago First seen · 212 lines · 2,010 tokens per session scan B e3b5e7d3c3bd

Subscribe to this mod's changes

FastPLMs AGENTS.md is an instructions file published in the GitHub repository Synthyra/FastPLMs (62 stars, last pushed 29d ago), with no licence file. It adds 3,241 tokens to every session, about $0.0130 per session on Opus 5.5. A static security scan graded it B with 1 finding (asks for root). No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

Scientific

FastPLMs AGENTS.md next to 6 instructions from other repositories
Mod	Type	Stars	Last push	Licence	Scan	Tokens	Works with
FastPLMs AGENTS.mdSynthyra/FastPLMs	Instructions file	62	29d ago	none	B	3,241	Codex, OpenCode
vscode buildNext.instructions.mdmicrosoft/vscode	Instructions file	195k	today	MIT	A	9,719	GitHub Copilot
vscode oss-third-party-notices.instructions.mdmicrosoft/vscode	Instructions file	195k	today	MIT	A	5,516	GitHub Copilot
next.js AGENTS.mdvercel/next.js	Instructions file	143k	yesterday	MIT	A	7,461	Codex, OpenCode
langchain AGENTS.mdlangchain-ai/langchain	Instructions file	149k	today	MIT	A	4,680	Codex, OpenCode
vscode copilot-instructions.mdmicrosoft/vscode	Instructions file	195k	today	MIT	A	3,093	GitHub Copilot
vscode model-prompts.instructions.mdmicrosoft/vscode	Instructions file	195k	today	MIT	A	2,022	GitHub Copilot

FastPLMs: Instructions file for Codex