Research instructions files

1,010 tagged Research, measured the same way as everything else here.

Browse within: model-context-protocol 52ai-tools 29knowledge-base 25academic-research 18obsidian 18academic-writing 17claude-code-plugin 17ai-research 15arxiv 15llm-tools 14skills 14fastmcp 13knowledge-graph 13literature-review 13

eyeroll CLAUDE.md

241

mnvsk97/eyeroll

Instructions file Claude Code

Instructions for mnvsk97/eyeroll, covering claude.md, project, commands, install and or with uv.

not rated 17 3mo ago A 901 tokens original MIT

sophymarine/openregistry

Instructions file Gemini CLI

Instructions for sophymarine/openregistry, covering openregistry — gemini cli extension, what to use it for, jurisdictions covered and access.

not rated 17 3mo ago A 522 tokens original Apache-2.0

LarryStanley/heptabase-mcp

Instructions file Claude Code

Instructions for LarryStanley/heptabase-mcp, covering claude.md, project overview, commands, install dependencies and development.

not rated 17 1y ago A 954 tokens original MIT archived

sift-mcp AGENTS.md

244

AppliedIR/sift-mcp

Instructions file CodexOpenCode

Instructions for AppliedIR/sift-mcp, covering valhuntir — forensic investigation platform, getting started, available mcp servers, malware analysis escalation and investigation recording.

not rated 17 3mo ago A 2,318 tokens original MIT

wd041216-bit/zero-api-key-web-search

Instructions file Gemini CLI

Gemini CLI instructions for wd041216-bit/zero-api-key-web-search, covering zero-api-key web search for gemini cli, install, minimum verification, when to trigger and what success looks like.

not rated 16 3mo ago A 392 tokens original MIT

icerain-cmd/humanities-superpowers

Instructions file CodexOpenCode

Instructions for icerain-cmd/humanities-superpowers: For humanities research, scholarly argument, close reading, literature review, citation work, manuscript review, or reviewer response.

not rated 16 15d ago A 192 tokens original MIT

SutroYaro GEMINI.md

248

cybertronai/SutroYaro

Instructions file Gemini CLI

Instructions for cybertronai/SutroYaro, covering gemini.md - sutro group research workspace, project context, read these first, core concepts and current best methods.

not rated 16 3mo ago A 2,086 tokens original Unlicense

doi-mcp CLAUDE.md

249

tfscharff/doi-mcp

Instructions file Claude Code

Instructions for tfscharff/doi-mcp, covering claude.md, project overview, architecture, modular structure and database adapter pattern.

not rated 15 1mo ago A 830 tokens original MIT

ClaimsMCP AGENTS.md

250

AdamGustavsson/ClaimsMCP

Instructions file CodexOpenCode

Instructions for AdamGustavsson/ClaimsMCP, covering agents.md - project documentation for ai agents, project overview, architecture at a glance, core components and 1. claimifyserver.py - mcp server entry point.

not rated 15 10mo ago A 4,064 tokens original Apache-2.0

devdotbo/perplexity-web-mcp

Instructions file Claude Code

Instructions for devdotbo/perplexity-web-mcp, covering perplexity web mcp, quick start, install, authenticate and query from terminal.

not rated 15 4mo ago A 736 tokens original MIT

cyanheads/openalex-mcp-server

Instructions file Claude CodeCodexOpenCode

AGENTS.md instructions for cyanheads/openalex-mcp-server, covering developer protocol, domain, mcp surface, config and what's next?.

not rated 14 changed 2d ago A 5,323 tokens copy · 70% Apache-2.0

NodeBenchAI CLAUDE.md

254

HomenShum/NodeBenchAI

Instructions file Claude Code

Claude Code instructions for HomenShum/NodeBenchAI, covering nodebench ai — claude code project instructions, deploy & merge workflow (p0 — read before merging anything), start here: prod-parity source of truth, legacy project overview and key files.

not rated 14 today A 4,629 tokens original MIT

paulieb89/uk-legal-mcp

Instructions file Claude Code

Claude Code instructions for paulieb89/uk-legal-mcp, covering claude.md — uk-legal-mcp, what this is, client ecosystems served, documentation index and commands.

not rated 14 +1 changed today A 3,785 tokens original MIT

lore AGENTS.md

256

jordanhindo/lore

Instructions file CodexOpenCode

Instructions for jordanhindo/lore, covering lore agent workflow, workflow levels, program workflow, model guidance and verification commands.

not rated 13 2mo ago A 2,407 tokens original MIT

aicayzer/companies-house-mcp

Instructions file Claude Code

Instructions for aicayzer/companies-house-mcp, covering companies house cli and mcp, what this is, layout, commands and conventions.

not rated 13 1mo ago A 1,155 tokens original MIT

pranavms13/web-search-mcp

Instructions file Claude Code

Instructions for pranavms13/web-search-mcp, covering web search mcp — project guide, commands, run against the obscura backend instead of selenium/chrome, architecture (main.py) and conventions & gotchas.

not rated 13 3mo ago A 788 tokens original MIT

pdfkb-mcp CLAUDE.md

259

juanqui/pdfkb-mcp

Instructions file Claude Code

Instructions for juanqui/pdfkb-mcp, covering claude.md, project overview, architecture, core components and key architecture patterns.

not rated 13 11mo ago A 1,101 tokens original MIT

James-Traina/compound-science

Instructions file Claude Code

Instructions for James-Traina/compound-science, covering compound-science plugin, core workflow, skills (20), workflow (6) — core research loop and chain (2) — automated multi-step execution.

not rated 13 5mo ago A 2,386 tokens original MIT

teoobarca/perplexity-mcp

Instructions file Claude Code

Instructions for teoobarca/perplexity-mcp, covering perplexity mcp server, environment, setup, project structure and configuration.

not rated 13 4mo ago A 1,188 tokens original MIT

stays CLAUDE.md

262

him229/stays

Instructions file Claude Code

Instructions for him229/stays, covering claude.md, project overview, development commands, core development tasks and install dependencies.

not rated 12 12d ago A 4,053 tokens original MIT

paper-pilot CLAUDE.md

263

aytzey/paper-pilot

Instructions file Claude Code

Instructions for aytzey/paper-pilot, covering claude.md, best fit, setup, first workflow to try and claude prompt patterns.

not rated 12 1mo ago A 614 tokens original MIT

maxkuminov/obsidian-mcp

Instructions file Claude Code

Claude Code instructions for maxkuminov/obsidian-mcp, covering obsidian mcp server, stack, project layout, infrastructure and public repo — host paths live outside the tree.

not rated 12 +1 yesterday A 2,666 tokens original MIT