2,315 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents8,442Claude Code6,875Data and AI3,584Git and workflow3,574Backend and APIs3,550Languages3,468Planning3,315Code review2,876Testing2,653DevOps and cloud2,462Writing and docs2,461Memory and context2,373
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| AgriciDaniel/youtuber agricidaniel.github.io A source-cited YouTube brain: creator growth & strategy, the developer API, and paid adver | 76 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 403 tok |
| idoforgod/Sermon-Assistant-AgenticWorkflow Sermon assistant AI agent workflow — based on AgenticWorkflow DNA | 75 | Claude Code, Codex, GitHub Copilot, Gemini CLI, OpenCode | 56 | 28,475 tok |
| banodoco/hivemind Drop-in skill so coding agents (Claude Code / Codex) can search the Banodoco Discord messa | 74 | Codex, OpenCode | 1 | 1,228 tok |
| ScrapeGraphAI/just-scrape scrapegraphai.com CLI for AI-powered web scraping, structured data extraction, web search, multi-page crawli | 74 | Claude Code | 2 | 169 tok |
| fei0810/bear-research-skills Some of my ideas and methods from academic research work, distilled into Agent Skills and | 73 | Claude Code | 1 | 793 tok |
| raystack/compass compass-raystack.vercel.app Compass is a context engine that builds a knowledge graph of your organization's metadata, | 73 | Claude Code | 1 | 620 tok |
| imdinu/apple-mail-mcp imdinu.github.io Apple Mail MCP server with full-coverage FTS5 body search. Reliable on large mailboxes whe | 73 | Claude Code | 1 | 5,758 tok |
| the-omega-institute/automath the-omega-institute.github.io LEAN4 AUTO YOUTUBE LIVING | 72 | Claude Code | 28 | 1,960 tok |
| cortex-works/cortex-scout A unified web extraction and stateful automation engine for AI. Replaces heavy testing fra | 71 | GitHub Copilot | 1 | 1,394 tok |
| ssdeanx/deep-research-mcp-server deanmachines.com MCP Deep Research Server using Gemini creating a Research AI Agent | 70 | Cursor | 1 | 10,405 tok |
| bradleygolden/hexdocs-mcp hexdocs.pm Semantic search for Hex documentation, right in your editor ✨ | 70 | Claude Code | 1 | 2,253 tok |
| color4-alt/CiteCheck Agent Skill: Check academic paper citations for format, queryability, thematic relevance, | 70 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 1,320 tok |
| monarch-initiative/dismech dismech.monarchinitiative.org Disease Mechanisms KB | 70 | Claude Code, Codex, GitHub Copilot, OpenCode | 43 | 267 tok |
| impecablemee/gtm-mcp gtm-mcp.com Open-source B2B cold outreach pipeline for Claude Code. One /launch command: find companie | 70 | Claude Code | 23 | 1,429 tok |
| uk0/web-search-fast A simple local web search MCP that can be provided externally at cluster scale. | 70 | Claude Code | 1 | 2,256 tok |
| Shiyao-Huang/awesome-agent-evolution agent-evolution.com Open survey and evidence map for AI agent evolution, self-evolving agents, memory, skills, | 68 | Claude Code, Codex, OpenCode | 2 | 10,532 tok |
| PatrickSys/codebase-context npmjs.com Codebase Context gives AI agents understanding of your codebase through semantic code sear | 68 | Codex, OpenCode | 1 | 3,238 tok |
| mlennie/hermes-mcp MCP server that lets any llm (i.e. Claude Desktop) delegate tasks to a local Hermes Agent | 68 | Claude Code | 1 | 2,833 tok |
| ngtiendong/Academic-Research-Agent-Skill Human-guided Research Agent Skill for Master and PhD students in CS, AI, math, and enginee | 68 | Claude Code | 1 | 829 tok |
| karthikrshet/Career-Agents career-agents.vercel.app The Open-Source AI Career Operating System. 167 Specialized AI Agents across 19 Divisions, | 68 | Claude Code, Codex, OpenCode | 13 | 609 tok |
| velmighty/youtube-to-knowledge Turn any YouTube video into a transcript, summary, and knowledge graph - powered by Claude | 67 | Claude Code | 4 | 290 tok |
| Vncntvx/dsh-zotero Zotero plugin for DeepSeek Harness: search and read papers in conversation, audit the lite | 67 | Codex, OpenCode | 1 | 2,022 tok |
| theo-kirby/cadex cadex.digital an agentic engine for full stack robot creation (CAD, CAM, ML, URDF, etc.) | 66 | Claude Code, Codex, OpenCode | 5 | 3,898 tok |
| drpwchen/paper-fetch drpwchen.com Publisher-aware full-text PDF fetcher — DOI in, PDF out via OA → publisher TDM APIs → your | 66 | Claude Code, Codex, OpenCode | 2 | 4,342 tok |
| ykdojo/paper-search Claude Code plugin for searching 250M+ academic papers via OpenAlex. Search by keyword, lo | 66 | Claude Code | 1 | 146 tok |
| quantskills/agent-quantspace AI-native quantitative research framework | 66 | Claude Code, Codex, OpenCode | 2 | 2,533 tok |
| yoloshii/gigaxity-deep-research Open-source deep research MCP. Qwen3-30B-A3B-Thinking via OpenRouter, cited web synthesis | 65 | Claude Code, Codex, OpenCode | 2 | 20,876 tok |
| ryanthedev/oberskills Discipline plugins for Claude Code — prompt engineering, agent dispatch, writing, and sear | 64 | Claude Code | 1 | 1,670 tok |
| heleninsights-dot/phd-deepread-workflow A professinal CLI workflow for PhD students to extract, analyze, and visualize academic pa | 64 | Claude Code, Codex, OpenCode | 2 | 2,974 tok |
| claude-world/trend-pulse Free trending topics aggregator — 20 sources, zero auth. CLI + Python library + MCP Server | 64 | GitHub Copilot | 1 | 64 tok |
| nico2sh/kimun nico2sh.github.io Simple note taking, powerful search, AI ready | 64 | Claude Code | 1 | 598 tok |
| SoftwareFoundationGroupAtKyotoU/pure-borrow Pure Borrow: Linear Haskell Meets Rust-Style Borrowing | 63 | Claude Code, Codex, OpenCode | 9 | 7,026 tok |
| DekaPrayoga/AurixAgent haikzs.tech 🤖 Autonomous Multi-Agent AI Workspace in your terminal. Codes, researches, and executes r | 62 | Codex, OpenCode | 1 | 840 tok |
| cooragent/ClarityFinance Clarity is a financial analysis agent framework built on native Claude-skill architecture. | 62 | Claude Code | 10 | — |
| RipeMangoBox/BITE Semi-automated research assistant and local knowledge base for paper analysis, ideation, c | 62 | Claude Code, Codex, OpenCode | 18 | 675 tok |
| MetamusicX/zissa-wiki Zissa Wiki — an LLM-maintained research knowledge base in plain markdown, maintained by an | 62 | Claude Code, Codex, Gemini CLI, OpenCode | 8 | 4,054 tok |
| chrisryugj/korean-patent-mcp plus.kipris.or.kr KIPRIS patent, utility model, trademark, and design search MCP — free search, field search | 62 | Claude Code | 1 | 2,457 tok |
| nozomio-labs/nia-rules-for-agents trynia.ai This repository provides pre-configured rules that teach AI coding agents how to effective | 61 | Claude Code, Codex | 3 | — |
| isdaniel/mcp_weather_server A Model Context Protocol (MCP) server that provides weather information using the Open-Met | 61 | Claude Code | 3 | — |
| htlin222/robust-lit-review Automated systematic literature review pipeline generating publication-ready manuscripts f | 61 | Claude Code | 4 | 492 tok |
| calkit/calkit docs.calkit.org A project framework, toolset, and web platform for collaborative, reproducible research. | 61 | Codex, OpenCode | 1 | 908 tok |
| badchars/osint-mcp-server OSINT intelligence MCP server for AI agents — 37 tools, 12 sources. Shodan, VirusTotal, Ce | 61 | Claude Code | 1 | 1,238 tok |
| IBM/galaxium-travels Demo application for IBM Bob. A complete full-stack application for booking interplanetary | 61 | Codex, OpenCode | 1 | 2,509 tok |
| AgriciDaniel/dataforseo-brain agricidaniel.github.io A source-cited operating memory for the entire DataForSEO v3 API. 12 modules, ~200+ endpoi | 61 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 408 tok |
| DenizOkcu/claude-code-ai-development-workflow Comprehensive slash commands for a complete software development lifecycle - from research | 60 | Claude Code | 2 | 1,691 tok |
| Othmane-Khadri/gtm-engineer-playbook gtm-engineer-playbook.vercel.app 10 installable Claude Code skills that turn your terminal into a GTM command center. ICP b | 60 | Claude Code | 10 | — |
| csml-rpi/AI-CFD-Scientist | 60 | Claude Code, Codex, OpenCode | 2 | 4,463 tok |
| Alexander-M-Dickerson/ai-asset-pricing Empirical Asset Pricing Tools | 59 | Claude Code, Codex, Gemini CLI, OpenCode | 56 | 3,707 tok |
| oksure/openalex-research-mcp MCP server for the OpenAlex API — search 240M+ scholarly works, analyze citations, track r | 59 | Claude Code | 1 | 2,844 tok |
| buriedsignals/spotlight spotlight.buriedsignals.com OSINT investigation orchestrator for journalists — structured briefs, methodology approval | 59 | Claude Code, Codex, OpenCode | 2 | 7,360 tok |