1,147 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,473Claude Code6,589Data and AI3,693Backend and APIs3,491Languages3,403Planning3,201Git and workflow3,131Code review2,731Memory and context2,354Testing2,335DevOps and cloud2,298Writing and docs2,284
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| nickzren/biomed-agent Connecting AI to biomedical data | 15 | Claude Code, Codex, OpenCode | 2 | 1,135 tok |
| AdamGustavsson/ClaimsMCP An MCP server that extracts claims from a text | 15 | Codex, OpenCode | 1 | 4,064 tok |
| ray-manaloto/notebooklm-claude-integration NotebookLM integration for Claude Desktop (MCP) and Claude Code (Plugin) - unified researc | 15 | Claude Code, Codex, OpenCode | 3 | 3,194 tok |
| russeell/jobfindsme A local-first AI job-hunting MCP Server: search BOSS Zhipin, Liepin, Zhaopin, and 51job wi | 15 | Codex, OpenCode | 1 | 2,682 tok |
| CodeAlive-AI/codealive-skills Agent skills for CodeAlive — semantic code search and AI-powered codebase answers. Works w | 14 | Claude Code, Codex, OpenCode | 2 | 639 tok |
| cyanheads/openalex-mcp-server npmjs.com Access the OpenAlex academic research catalog - 270M+ publications through MCP. STDIO & St | 14 | Claude Code, Codex, OpenCode | 2 | 10,734 tok |
| jordanhindo/lore Agent Skill & CLI for infinite multi-harness session context. Any agent, any session, any | 14 | Codex, OpenCode | 1 | 2,407 tok |
| HomenShum/NodeBenchAI nodebenchai.com Entity intelligence for any company, market, or question — not a chatbot that answers once | 14 | Claude Code, Codex, OpenCode | 27 | 34,829 tok |
| maweiruc/stat-toolkits-eif Documentation-first toolkit for deriving, validating, and auditing efficient influence fun | 14 | Codex, OpenCode | 1 | 1,072 tok |
| imsai-sh/dsh-1024store deepseek1024.com DeepSeek Harness plugin store, marketplace, and hub — 11,000+ dsh plugins with search, ran | 14 | Claude Code, Codex, OpenCode | 2 | 3,304 tok |
| Emily2040/rapid-domain-mastery A universal Agent Skill for deep, multi-source learning across 18+ AI coding agents | 13 | Claude Code, Codex, GitHub Copilot, Gemini CLI, OpenCode | 5 | 872 tok |
| narailabs/doc-wiki Documentation wiki generator + maintainer — Claude Code skill + agents + TypeScript helper | 13 | Claude Code, Codex, Gemini CLI, OpenCode | 4 | 8,196 tok |
| tarekmo0/HunterStick A persistent context and fieldcraft system for AI-assisted bug bounty hunting. | 13 | Claude Code, Codex, OpenCode | 37 | 7,495 tok |
| martinzokov/open-conclave AI agents conclave | 13 | Claude Code, Codex, OpenCode | 5 | 584 tok |
| Jack-Liang/sap-for-agents SAP NWRFC → REST gateway designed for AI agents: search, inspect, invoke RFC/BAPI, read ta | 13 | Codex, OpenCode | 1 | 5,382 tok |
| ApiliumCode/mayros apilium.com The governed AI agent platform: semantic memory, intelligent model routing, an MCP server, | 12 | Codex, OpenCode | 1 | 5,416 tok |
| him229/stays pypi.org Google Hotels MCP server and Python library — reverse-engineered batchexecute client with | 12 | Claude Code, Codex, OpenCode | 2 | 4,977 tok |
| aytzey/paper-pilot Let Codex and Claude find, download, and read full research papers. A local MCP server wit | 12 | Claude Code, Codex, OpenCode | 2 | 2,411 tok |
| u9401066/med-paper-assistant u9401066.github.io Auditable MCP + cross-agent harness for autonomous and human-guided academic writing—from | 12 | Claude Code, Codex, GitHub Copilot, OpenCode | 50 | 8,475 tok |
| grapeot/tavily-skill Agent-oriented Tavily search and extract CLI with stable JSON output | 12 | Codex, OpenCode | 1 | 285 tok |
| Toadoum/ai-research-skill | 12 | Codex, OpenCode | 1 | 224 tok |
| dengxu11111/dual-ai-paper-coach Claude Code writes the paper. Codex CLI independently reviews it. Together they produce a | 12 | Claude Code, Codex, OpenCode | 10 | 3,597 tok |
| guyumengyue/zotero-obsidian-codex-workflow Windows-first Zotero Obsidian Codex literature workflow with one-step bootstrap skill | 12 | Claude Code, Codex, OpenCode | 3 | 484 tok |
| Naptila/recaf-mcp An MCP server for headless Recaf analysis, decompilation, search, bytecode patching, and J | 12 | Codex, OpenCode | 1 | 887 tok |
| NewTurn2017/hermes-profile-kit Drop-in Hermes Agent profile kit. Creates four isolated profiles (coder, assistant, resear | 12 | Codex, OpenCode | 1 | 1,272 tok |
| SPYfighting/my-academic-skills Research skills for Claude Code, Codex, and OpenCode. | 12 | Claude Code, Codex, OpenCode | 2 | 648 tok |
| Muvon/octofs octomind.run Rust MCP server giving AI agents filesystem superpowers: view, edit, batch-edit, shell and | 11 | Codex, OpenCode | 1 | 2,829 tok |
| SpaceFrontiers/mcp spacefrontiers.org Citable research retrieval for AI agents across papers, books, patents, Wikipedia, and pub | 11 | Codex, OpenCode | 1 | 679 tok |
| Agentic-Assets/corbis-literature-starter-kit corbis.ai A lightweight Claude Code project for exploring academic literature, brainstorming researc | 11 | Claude Code, Codex, OpenCode | 4 | 3,020 tok |
| schub-tech/llm-ideation-wiki schub.tech AI-maintained Notion wiki that pressure-tests business ideas into evidence-bound verdicts. | 11 | Claude Code, Codex, OpenCode | 2 | 858 tok |
| jimezsa/opencolab opencolab.ai 🐙 Accelerating Scientific Discovery — Turn your research into an always-on autonomous lab | 11 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 5,041 tok |
| CyannSHI/ai-interview-kit Engineer user-research methodologies into AI prompts — professional-grade phone interviews | 11 | Claude Code, Codex, GitHub Copilot, OpenCode | 3 | 911 tok |
| pr1m8/haive-mcp pypi.org Dynamic MCP integration for AI agents — search 1,960+ servers, install with HITL approval | 11 | Claude Code, Codex, OpenCode | 2 | 3,311 tok |
| SchmiedmayerLab/heartwood schmiedmayerlab.github.io Compliance-first coding harness for working with sensitive biomedical research data. | 11 | Claude Code, Codex, OpenCode | 2 | 2,125 tok |
| simonsysun/seeklink SeekLink — hybrid semantic search for markdown vaults. Four-channel RRF fusion, MLX rerank | 11 | Claude Code, Codex, OpenCode | 2 | 1,709 tok |
| Sungmin-Cho/skill-legal-kr A Korean law and case law lawyer skill (Claude Code project skill) | 11 | Claude Code, Codex, OpenCode | 4 | 1,817 tok |
| leadpoet/leadpoet subnet71.com Open-source Bittensor subnet for a global AI agent competition in sales intelligence | 11 | Claude Code, Codex, OpenCode | 2 | 2,338 tok |
| aeroxy/gsearch-cli Standalone Google Search CLI powered by Gemini API, sharing auth with Gemini CLI. | 11 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 328 tok |
| nevaaron/x-smart-read Give your AI agent smart, budget-optimised read access to X/Twitter. Official API, no scra | 11 | Codex, OpenCode | 1 | 2,001 tok |
| P1-103n1x/bab-ilu A self-growing LLM-Wiki with pre-installed discipline-specific lenses. Forked from skyllwt | 11 | Claude Code, Codex | 20 | 2,094 tok |
| a-attia/scicomp-research-skills Agent skills + workflow templates for scientific-computing research (papers and software). | 11 | Codex, OpenCode | 1 | 7,960 tok |
| hevangel/dvcon_ai_library DVCON AI library | 11 | Claude Code, Codex, OpenCode | 3 | 10,527 tok |
| pearlengine/GTM.Bench | 11 | Codex | 1 | — |
| Ar9av/AgentTower A real-time web UI for monitoring, searching, and controlling Claude Code and Codex CLI se | 11 | Claude Code, Codex, OpenCode | 2 | 1,628 tok |
| greyhaven-ai/sygaldry Discover and integrate reusable agents and tools into your Python projects | 11 | Claude Code, Codex, OpenCode | 24 | 5,947 tok |
| mdrideout/viberag viberag.ai viberag is an MCP server for local codebase semantic search | 11 | Claude Code, Codex, OpenCode | 2 | 972 tok |
| briancl2/CustomerNewsletter briancl2.github.io | 11 | Claude Code, Codex, GitHub Copilot, OpenCode | 24 | 1,219 tok |
| haruhisa-enomoto/math-research-harness An agent-ready repository template for mathematical research: scope, literature, evidence, | 11 | Claude Code, Codex, OpenCode | 2 | 3,029 tok |
| dcroote/lambs Local Analysis of mAb Sequences | 11 | Codex, OpenCode | 1 | 1,793 tok |
| VeniVeci/VLM-wiki A full-modal personal knowledge base built on the Karpathy LLM Wiki concept. | 11 | Codex, OpenCode | 1 | 1,638 tok |