1,761 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,450Claude Code6,586Data and AI3,698Backend and APIs3,488Languages3,402Planning3,191Git and workflow3,129Code review2,728Memory and context2,353Testing2,330DevOps and cloud2,293Writing and docs2,283
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| nickzren/biomed-agent Connecting AI to biomedical data | 15 | Claude Code, Codex, OpenCode | 2 | 1,135 tok |
| tfscharff/doi-mcp A Model Context Protocol (MCP) server that prevents citation hallucination by verifying ac | 15 | Claude Code | 1 | 830 tok |
| barvhaim/remy-mcp A Model Context Protocol (MCP) server that provides programmatic access to Israeli Land Au | 15 | Claude Code, GitHub Copilot | 2 | 3,241 tok |
| Agnuxo1/p2pclaw-mcp-server p2pclaw.com MCP server + REST API for the P2PCLAW decentralized AI research network. Lets agents publi | 15 | Claude Code | 1 | 2,252 tok |
| ray-manaloto/notebooklm-claude-integration NotebookLM integration for Claude Desktop (MCP) and Claude Code (Plugin) - unified researc | 15 | Claude Code, Codex, OpenCode | 3 | 3,194 tok |
| capazme/mcp-legal-it MCP server + Claude plugin for Italian law — 200+ tools: verified statutes, case law searc | 15 | Claude Code | 2 | 13,401 tok |
| miyamamoto/jvlink-mcp-server JRA racing analysis MCP server for JVLinkToSQLite databases | 15 | Claude Code | 2 | — |
| paulieb89/uk-legal-mcp bouch.dev UK legal research MCP server — case law, legislation, Hansard, bills, committees, HMRC, OS | 15 | Claude Code | 6 | 3,785 tok |
| istefox/istefox-dt-mcp MCP server for DEVONthink 4 - best-in-class connector with RAG-augmented search | 14 | Claude Code | 1 | 2,309 tok |
| CodeAlive-AI/codealive-skills Agent skills for CodeAlive — semantic code search and AI-powered codebase answers. Works w | 14 | Claude Code, Codex, OpenCode | 2 | 639 tok |
| cyanheads/openalex-mcp-server npmjs.com Access the OpenAlex academic research catalog - 270M+ publications through MCP. STDIO & St | 14 | Claude Code, Codex, OpenCode | 2 | 10,646 tok |
| mrgoonie/searchapi-mcp-server TypeScript Model Context Protocol (MCP) server boilerplate providing search API tools/reso | 14 | Claude Code | 1 | 398 tok |
| 2389-research/simmer 2389.ai Iterative artifact refinement with investigation-first judge board - constructs problem-sp | 14 | Claude Code | 1 | 1,220 tok |
| nikships/ultimate-image-gen-mcp pypi.org Ultimate Gemini 3.1 Flash Image MCP server with 4K generation, Google Search grounding, re | 14 | Claude Code | 1 | 4,131 tok |
| HomenShum/NodeBenchAI nodebenchai.com Entity intelligence for any company, market, or question — not a chatbot that answers once | 14 | Claude Code, Codex, OpenCode | 27 | 34,829 tok |
| nickjlamb/pubcrawl pharmatools.ai MCP server giving AI assistants verifiable access to PubMed, Europe PMC, US/UK drug labell | 14 | Claude Code | 1 | 1,395 tok |
| Averyy/fetchaller-mcp fetchaller.com Simple MCP server that allows Claude Code to fetch URLs without permission prompts (includ | 14 | Claude Code | 1 | 3,271 tok |
| SiluPanda/academic-researcher Skill to write academic research papers | 14 | Claude Code | 1 | — |
| imsai-sh/dsh-1024store deepseek1024.com DeepSeek Harness plugin store, marketplace, and hub — 11,000+ dsh plugins with search, ran | 14 | Claude Code, Codex, OpenCode | 2 | 3,304 tok |
| Emily2040/rapid-domain-mastery A universal Agent Skill for deep, multi-source learning across 18+ AI coding agents | 13 | Claude Code, Codex, GitHub Copilot, Gemini CLI, OpenCode | 5 | 872 tok |
| aicayzer/companies-house-mcp companies-house.uk CLI and MCP server for the UK Companies House API — company search, profiles, officers, fi | 13 | Claude Code | 1 | 1,155 tok |
| pranavms13/web-search-mcp A Model Context Protocol (MCP) server that provides web search functionality using a headl | 13 | Claude Code | 1 | 788 tok |
| narailabs/doc-wiki Documentation wiki generator + maintainer — Claude Code skill + agents + TypeScript helper | 13 | Claude Code, Codex, Gemini CLI, OpenCode | 4 | 8,196 tok |
| juanqui/pdfkb-mcp A PDF document RAG MCP that is easy to setup, supports completely local parsing and embedd | 13 | Claude Code | 1 | 1,101 tok |
| mixedbread-ai/skills mixedbread.com Agent skills for search, RAG, and document parsing with Mixedbread. Install with: npx skil | 13 | Claude Code | 1 | 1,397 tok |
| caelum29/calibre-mcp npmjs.com The most capable Calibre MCP server — full read/write tools plus multilingual semantic sea | 13 | Claude Code | 1 | 1,746 tok |
| James-Traina/compound-science Research workflow toolkit for structural econometrics, causal inference, game theory, and | 13 | Claude Code | 1 | 2,386 tok |
| teoobarca/perplexity-mcp Free Perplexity AI MCP server with multi-account pooling, React admin dashboard, zero-cost | 13 | Claude Code | 1 | 1,188 tok |
| marduk191/qwen3_mcp MCP server for LM Studio with 80+ tools - file ops, git, web search, skills system | 13 | Claude Code | 1 | 5,679 tok |
| dbcls/togomcp togomcp.rdfportal.org MCP server for life-science knowledge graphs | 13 | Claude Code | 9 | 3,924 tok |
| tarekmo0/HunterStick A persistent context and fieldcraft system for AI-assisted bug bounty hunting. | 13 | Claude Code, Codex, OpenCode | 37 | 7,495 tok |
| martinzokov/open-conclave AI agents conclave | 13 | Claude Code, Codex, OpenCode | 5 | 584 tok |
| ericluo04/claude-academic-workflow Academic research workflow for Claude Code: 20 skills covering causal inference (DiD, RDD, | 13 | Claude Code | 1 | 3,608 tok |
| jordiboehme/crystalline Local-first crystalline intelligence for AI agents: the knowledge that endures across sess | 13 | Claude Code | 1 | 3,747 tok |
| terilios/smartsheet-server MCP server providing healthcare analytics capabilities for Smartsheet, including clinical | 12 | Claude Code | 1 | 2,316 tok |
| him229/stays pypi.org Google Hotels MCP server and Python library — reverse-engineered batchexecute client with | 12 | Claude Code, Codex, OpenCode | 2 | 4,977 tok |
| aytzey/paper-pilot Let Codex and Claude find, download, and read full research papers. A local MCP server wit | 12 | Claude Code, Codex, OpenCode | 2 | 2,411 tok |
| MaesHughes/wuxing-search-mcp Wuxing Search MCP is a powerful, unlimited search server built on top of SearXNG. It integ | 12 | Claude Code | 2 | — |
| Xinyang-Li666/SciCrucible A Claude-based scientific intelligence knowledge base covering the full cycle from literat | 12 | Claude Code | 10 | 1,107 tok |
| u9401066/med-paper-assistant u9401066.github.io Auditable MCP + cross-agent harness for autonomous and human-guided academic writing—from | 12 | Claude Code, Codex, GitHub Copilot, OpenCode | 50 | 8,475 tok |
| dengxu11111/dual-ai-paper-coach Claude Code writes the paper. Codex CLI independently reviews it. Together they produce a | 12 | Claude Code, Codex, OpenCode | 10 | 3,597 tok |
| maxkuminov/obsidian-mcp Self-hosted MCP server for Obsidian: semantic + full-text search, wikilink graph, note CRU | 12 | Claude Code | 1 | 3,811 tok |
| guyumengyue/zotero-obsidian-codex-workflow Windows-first Zotero Obsidian Codex literature workflow with one-step bootstrap skill | 12 | Claude Code, Codex, OpenCode | 3 | 484 tok |
| tanchihq/tanchi tanchi.io Autonomous B2B prospecting engine. The AI sources, researches and writes your outreach eve | 12 | Claude Code | 1 | 346 tok |
| ronnycoding/my-personal-assistant Personal AI assistant supporting Claude Code and Gemini CLI - productivity automation, App | 12 | Claude Code, Gemini CLI | 25 | 2,523 tok |
| Agentic-Assets/corbis-literature-starter-kit corbis.ai A lightweight Claude Code project for exploring academic literature, brainstorming researc | 11 | Claude Code, Codex, OpenCode | 4 | 3,020 tok |
| schub-tech/llm-ideation-wiki schub.tech AI-maintained Notion wiki that pressure-tests business ideas into evidence-bound verdicts. | 11 | Claude Code, Codex, OpenCode | 2 | 858 tok |
| jimezsa/opencolab opencolab.ai 🐙 Accelerating Scientific Discovery — Turn your research into an always-on autonomous lab | 11 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 5,041 tok |
| CyannSHI/ai-interview-kit Engineer user-research methodologies into AI prompts — professional-grade phone interviews | 11 | Claude Code, Codex, GitHub Copilot, OpenCode | 3 | 911 tok |
| xinthink/reader-mcp-server Connect your Readwise Reader library to LLMs. | 11 | Claude Code | 1 | 707 tok |