1,754 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents8,442Claude Code6,875Data and AI3,584Git and workflow3,574Backend and APIs3,550Languages3,468Planning3,315Code review2,876Testing2,653DevOps and cloud2,462Writing and docs2,461Memory and context2,373
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| juanqui/pdfkb-mcp A PDF document RAG MCP that is easy to setup, supports completely local parsing and embedd | 13 | Claude Code | 1 | 1,101 tok |
| MaesHughes/wuxing-search-mcp Wuxing Search MCP is a powerful, unlimited search server built on top of SearXNG. It integ | 13 | Claude Code | 2 | — |
| Xinyang-Li666/SciCrucible A Claude-based scientific intelligence knowledge base covering the full cycle from literat | 13 | Claude Code | 10 | 1,107 tok |
| koljaschoepe/scientific-writing Deine wissenschaftliche Arbeit mit Claude Code: Thema, Recherche, Exposé, Schreiben, Prüfe | 13 | Claude Code, Codex, OpenCode | 23 | 1,286 tok |
| guyumengyue/zotero-obsidian-codex-workflow Windows-first Zotero Obsidian Codex literature workflow with one-step bootstrap skill | 13 | Claude Code, Codex, OpenCode | 3 | 484 tok |
| YGao2005/scholar-feed-mcp scholarfeed.org MCP server for searching 600,000+ CS/AI research papers with citation graphs, full text, e | 13 | Claude Code | 1 | 2,034 tok |
| PLA-yi/Social-Media-Scraper-Skills Agent skills for the Social Media Scraper project (Douyin, TikTok, Reddit, YouTube, X) | 13 | Claude Code | 1 | 679 tok |
| narumiruna/gurume narumiruna.github.io Python CLI, TUI, and MCP server for searching Japanese restaurants on Tabelog | 13 | Claude Code, Codex, OpenCode | 2 | 1,035 tok |
| Seonh0/naver-land-mcp An MCP server for querying nationwide apartment listings, market prices, and actual transa | 13 | Claude Code | 1 | 803 tok |
| AutoConference/AutoConference-skill AutoConference is an Open-sourced AI-agents platform that simulates an openreview-style au | 13 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 2,419 tok |
| mrmos/cosmos-mcp npmjs.com Unofficial MCP server for cosmos.so. Search, browse and build visual moodboards with Claud | 13 | Claude Code | 1 | 770 tok |
| everclear077/dsh-progressive-tools Progressive tool discovery for DeepSeek Harness — tiny stable surface, searchable catalog, | 13 | Claude Code, Codex, OpenCode | 2 | 944 tok |
| schub-tech/llm-ideation-wiki schub.tech AI-maintained Notion wiki that pressure-tests business ideas into evidence-bound verdicts. | 12 | Claude Code, Codex, OpenCode | 2 | 1,156 tok |
| markusl/statfin-mcp markusl.github.io Production-grade Model Context Protocol (MCP) server for Statistics Finland's StatFin data | 12 | Claude Code | 1 | 802 tok |
| u9401066/med-paper-assistant u9401066.github.io Auditable MCP + cross-agent harness for autonomous and human-guided academic writing—from | 12 | Claude Code, Codex, GitHub Copilot, OpenCode | 61 | 8,748 tok |
| dengxu11111/dual-ai-paper-coach Claude Code writes the paper. Codex CLI independently reviews it. Together they produce a | 12 | Claude Code, Codex, OpenCode | 10 | 3,597 tok |
| reizam/claude-md-templates Two ready-to-use CLAUDE.md templates (global + project) based on ETH Zurich research on co | 12 | Claude Code | 1 | 238 tok |
| Ar9av/AgentTower A real-time web UI for monitoring, searching, and controlling Claude Code and Codex CLI se | 12 | Claude Code, Codex, OpenCode | 2 | 1,628 tok |
| codeChap/mcp-server-yii2-ai-boost MCP server for Yii2 — 16 tools for database inspection, semantic search, profiling, and AI | 12 | Claude Code | 1 | 3,408 tok |
| xueqingpeng/trading-analysis | 12 | Claude Code | 5 | — |
| bradduy/wiki-knowledge-compiler Wiki Knowledge Compiler: Turn your documents into a personal LLM knowledge base | 12 | Claude Code | 10 | 1,688 tok |
| YunyueLi/greenroom greenroom.ungetsu.net Seven agent skills for interview preparation, a 27-role knowledge base, and an open Markdo | 12 | Claude Code, Codex, OpenCode | 2 | 1,146 tok |
| pedrohcgs/Claude-Mini 4-hour Notre Dame faculty seminar on agentic AI for academic research — Quarto slides + cu | 12 | Claude Code | 4 | 1,337 tok |
| tanchihq/tanchi tanchi.io Autonomous B2B prospecting engine. The AI sources, researches and writes your outreach eve | 12 | Claude Code | 1 | 346 tok |
| 3xLABS/bachelor skills und anleitung zum schreiben von wissenschaftlichen arbeiten | 12 | Claude Code | 9 | — |
| VeryMath/co-mathematician Co-mathematician project for collaborative AI-assisted mathematical research. | 12 | Claude Code, Codex, OpenCode | 9 | 2,327 tok |
| guimatheus92/social-knowledge-base Turn social-media creators' videos into a searchable, curated knowledge base — Next.js dow | 12 | Claude Code | 1 | 2,490 tok |
| Pablo-gitub/optees optees.it Optees is an open-source desktop toolkit for optimization: LP (SciPy/HiGHS), MILP (OR-Tool | 12 | Claude Code, Codex, OpenCode | 2 | 1,276 tok |
| ronnycoding/my-personal-assistant Personal AI assistant supporting Claude Code and Gemini CLI - productivity automation, App | 12 | Claude Code, Gemini CLI | 25 | 2,523 tok |
| FuZhiyu/superRA An agentic workflow for economic research | 12 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 2,367 tok |
| Agentic-Assets/corbis-literature-starter-kit corbis.ai A lightweight Claude Code project for exploring academic literature, brainstorming researc | 11 | Claude Code, Codex, OpenCode | 4 | 1,775 tok |
| jimezsa/opencolab opencolab.ai 🐙 Accelerating Scientific Discovery — Turn your research into an always-on autonomous lab | 11 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 5,365 tok |
| CyannSHI/ai-interview-kit Engineer user-research methodologies into AI prompts — professional-grade phone interviews | 11 | Claude Code, Codex, GitHub Copilot, OpenCode | 3 | 911 tok |
| xinthink/reader-mcp-server Connect your Readwise Reader library to LLMs. | 11 | Claude Code | 1 | 707 tok |
| pr1m8/haive-mcp pypi.org Dynamic MCP integration for AI agents — search 1,960+ servers, install with HITL approval | 11 | Claude Code, Codex, OpenCode | 2 | 3,311 tok |
| SchmiedmayerLab/heartwood schmiedmayerlab.github.io Compliance-first coding harness for working with sensitive biomedical research data. | 11 | Claude Code, Codex, OpenCode | 2 | 2,217 tok |
| simonsysun/seeklink SeekLink — hybrid semantic search for markdown vaults. Four-channel RRF fusion, MLX rerank | 11 | Claude Code, Codex, OpenCode | 2 | 1,709 tok |
| revfactory/samsung-report revfactory.github.io | 11 | Claude Code | 9 | 239 tok |
| Sungmin-Cho/skill-legal-kr A Korean law and case law lawyer skill (Claude Code project skill) | 11 | Claude Code, Codex, OpenCode | 4 | 1,817 tok |
| tsdfs930514/econ-research-workflow Claude Code skills framework for economics research (DID, IV, RDD, Panel, SDID) | 11 | Claude Code | 14 | 3,543 tok |
| aeroxy/gsearch-cli Standalone Google Search CLI powered by Gemini API, sharing auth with Gemini CLI. | 11 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 328 tok |
| AICMO/Autonomous-Agent-X-Bluesky Self-Managing Agent to Autonomously and Iteratively accomplish given goal/task/outcome (ar | 11 | Claude Code | 5 | 15,003 tok |
| mindstone/rebel-app Rebel: open-source agentic AI desktop app. Public mirror — source of truth is internal; pu | 11 | Claude Code, Codex, OpenCode | 18 | 3,733 tok |
| P1-103n1x/bab-ilu A self-growing LLM-Wiki with pre-installed discipline-specific lenses. Forked from skyllwt | 11 | Claude Code | 20 | 2,094 tok |
| mevans2120/design-suite-claude-skills Claude skills for digital product design: user research, concept exploration, and componen | 11 | Claude Code | 3 | — |
| hevangel/dvcon_ai_library DVCON AI library | 11 | Claude Code, Codex, OpenCode | 3 | 10,527 tok |
| PancrePal-xiaoyibao/mcp-pubmed-server-pancrpal An MCP tool that enables local agents to efficiently crawl PubMed papers via API; original | 11 | Claude Code | 1 | 884 tok |
| creativec09/stm32 STM32 MCP Documentation Server with semantic search, Claude Code agents, and comprehensive | 11 | Claude Code | 2 | 3,246 tok |
| greyhaven-ai/sygaldry Discover and integrate reusable agents and tools into your Python projects | 11 | Claude Code, Codex, OpenCode | 24 | 5,947 tok |
| Eventual-Inc/local-image-search Give your AI coding agent the ability to search through all your local images. Privacy-fir | 11 | Claude Code | 1 | 921 tok |