1,754 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents8,442Claude Code6,875Data and AI3,584Git and workflow3,574Backend and APIs3,550Languages3,468Planning3,315Code review2,876Testing2,653DevOps and cloud2,462Writing and docs2,461Memory and context2,373
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| blazickjp/arxiv-mcp-server pulsemcp.com A local MCP server for agent literature work. Original-LaTeX section reads, BibTeX from ar | 3,258 | Claude Code | 1 | 838 tok |
| viperrcrypto/Siftly Local Twitter/X bookmark organizer with AI categorization and mindmap visualization | 3,087 | Claude Code | 1 | 1,079 tok |
| cocoindex-io/cocoindex-code cocoindex.io A super light-weight embedded code search engine CLI (AST based) that just works - improv | 2,965 | Claude Code | 1 | 2,057 tok |
| ShinMegamiBoson/OpenPlanter | 2,816 | Claude Code | 3 | 225 tok |
| puaclaw/PUAClaw puaclaw.org Claws will eventually take over the world, PUAClaw is All You Need | 2,697 | Claude Code | 1 | 2,732 tok |
| K-Dense-AI/claude-scientific-writer k-dense.ai A general purpose scientific writer | 2,556 | Claude Code, Codex, OpenCode | 28 | 10,828 tok |
| noamseg/interview-coach-skill | 2,494 | Claude Code | 1 | — |
| NVIDIA-NeMo/DataDesigner docs.nvidia.com 🎨 NeMo Data Designer: Generate high-quality synthetic data from scratch or from seed data | 2,399 | Claude Code, Codex, OpenCode | 13 | 935 tok |
| LichAmnesia/GPT-Prompt-Hub GPT-Prompt-Hub is an open-source community-driven repository dedicated to the collection, | 2,391 | Claude Code | 1 | 1,312 tok |
| zakirkun/deep-eye Deep Eye orchestrates multiple AI providers (OpenAI, Claude, Grok, Gemini, OLLAMA, Groq, M | 2,366 | Claude Code, Codex, OpenCode | 8 | 2,919 tok |
| tsingyuai/scientify Automatic and end-to-end scientific research workflow. Produces state-of-the-art level res | 2,251 | Claude Code | 1 | 1,896 tok |
| kenn-io/msgvault msgvault.io Archive a lifetime of email and chat. Offline search, analytics, and AI query over your fu | 2,179 | Claude Code, Codex, OpenCode | 2 | 2,252 tok |
| GoogleCloudPlatform/scion | 2,097 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 1,479 tok |
| ai4s-research/open-science openedscience.com Open Science Desktop — local-first, model-agnostic AI research workbench for macOS, Window | 2,078 | Claude Code, Codex, OpenCode | 3 | 950 tok |
| afar1/fieldtheory-cli fieldtheory.dev Field Theory CLI for bookmarks, Library, commands, and agent workflows | 2,055 | Claude Code | 3 | 610 tok |
| kenforthewin/atomic atomicapp.ai Self-hosted, semantically-connected personal knowledge base | 2,000 | Claude Code, Codex, OpenCode | 2 | 3,332 tok |
| NVIDIA-AI-Blueprints/video-search-and-summarization build.nvidia.com NVIDIA AI Blueprint for video search and summarization (VSS) is a GPU-accelerated referenc | 1,968 | Claude Code, Codex, OpenCode | 2 | 1,342 tok |
| sonofmagic/weapp-tailwindcss tw.weapp.dev Bring Tailwind CSS's atomic development experience to every platform! | 1,864 | Claude Code, Codex, OpenCode | 5 | 4,453 tok |
| LearnPrompt/ai-news-radar learnprompt.github.io 24h AI/tech news radar with GitHub Actions, live web UI, and Scout Skill for AI sources. | 1,812 | Claude Code, Codex, OpenCode | 2 | 517 tok |
| devenjarvis/lathe Generate hands-on, multi-part technical tutorials on demand, with LLM skills tuned to make | 1,714 | Claude Code, Codex, OpenCode | 9 | 6,134 tok |
| tinyfish-io/bigset-oss Open-source BigSet — self-hostable live datasets populated by TinyFish web agents | 1,706 | Claude Code, Codex, OpenCode | 2 | 1,340 tok |
| skyllwt/AutoSci Karpathy's LLM-Wiki vision, fully realized — wiki-centric full-lifecycle AI research platf | 1,706 | Claude Code | 30 | 584 tok |
| team-reflect/reflect-open Open-source Reflect rewrite: A local-first AI agent-friendly Markdown note-taking app | 1,610 | Claude Code, Codex, OpenCode | 4 | 3,779 tok |
| jsmastery-pro/skills jsmastery.com Agentic Development skills behind the JS Mastery workflow | 1,602 | Claude Code | 3 | 582 tok |
| nickclyde/duckduckgo-mcp-server A Model Context Protocol (MCP) server that provides web search capabilities through DuckDu | 1,568 | Claude Code | 1 | 1,548 tok |
| disler/claude-code-hooks-multi-agent-observability Real-time monitoring for Claude Code agents through simple hook event tracking. | 1,567 | Claude Code, Codex, Gemini CLI, OpenCode | 40 | 88 tok |
| PaperDebugger/paperdebugger paperdebugger.com A Plugin-Based Multi-Agent System for In-Editor Academic Writing, Review, and Editing | 1,554 | Claude Code | 1 | — |
| mattzh72/articraft Reference code for the articraft paper. | 1,539 | Claude Code, Codex, OpenCode | 2 | 2,783 tok |
| nvk/llm-wiki llm-wiki.net LLM-compiled knowledge bases for any AI agent. Parallel multi-agent research, thesis-drive | 1,510 | Claude Code, Codex, OpenCode | 2 | 16,357 tok |
| limecloud/lime limeai.run Full-stack AI agent for coding, files, terminals, tools, research, content, multimodal wor | 1,493 | Claude Code, Codex, OpenCode | 2 | 3,577 tok |
| bramses/chatgpt-md A (nearly) seamless integration of ChatGPT into Obsidian. | 1,456 | Claude Code, Codex, OpenCode | 2 | 2,190 tok |
| OpenRaiser/NanoResearch 🦞+🔬 NanoResearch: The Autonomous AI Research Assistant | 1,332 | Claude Code, Codex, OpenCode | 2 | 1,586 tok |
| 917Dhj/DeepPaperNote 917dhj.github.io DeepPaperNote is an agent skill for deep-reading a single paper and generating high-qualit | 1,304 | Claude Code, Codex, OpenCode | 2 | 986 tok |
| handsome-rich/Awesome-Auto-Research-Tools A curated collection of automated research tools, covering literature search, paper readin | 1,275 | Claude Code | 1 | 75 tok |
| liliu-z/stashbase stashbase.ai An open-source, local-first writing workspace where you can write with Claude Code and Cod | 1,273 | Claude Code, Codex, OpenCode | 2 | 3,038 tok |
| frank890417/taiwan-md taiwan.md 🇹🇼 Let the whole world fully understand Taiwan | An open-source, AI-friendly knowledge b | 1,237 | Claude Code, Codex | 47 | 4,924 tok |
| nspady/google-calendar-mcp MCP integration for Google Calendar to manage events. | 1,211 | Claude Code, Codex, OpenCode | 10 | 2,636 tok |
| duanyytop/agents-radar duanyytop.github.io Daily AI ecosystem digest from 10 sources (GitHub, ArXiv, HN, HuggingFace, Product Hunt, D | 1,152 | Claude Code, Codex, OpenCode | 2 | 7,079 tok |
| poco-ai/Agentero agentero.app An Agent-friendly way to manage literature. | 1,137 | Claude Code, Codex, OpenCode | 6 | 2,038 tok |
| Kc1t/alethe-agents alethe-agents.kc1t.com A local-first desktop workspace for running, organizing, and resuming multiple coding age | 1,122 | Claude Code, Codex, OpenCode | 3 | 4,236 tok |
| liangdabiao/amazon-sorftime-research-MCP-skill agents.liangdabiao.com Amazon product selection: comprehensive Listing penetration analysis reports, plus all-cat | 1,081 | Claude Code | 1 | 2,133 tok |
| boyter/cs codespelunker - CLI code search tool that understands code structure and ranks results by | 1,080 | Claude Code | 1 | 1,022 tok |
| marc-shade/world-intel-mcp 160-tool MCP server for real-time global intelligence from free public APIs: markets, liqu | 1,064 | Claude Code | 1 | 2,836 tok |
| yokingma/SearChat isou.chat Search + Chat = SearChat (AI Chat with Search), supporting OpenAI/Anthropic/VertexAI/Gemin | 1,062 | Claude Code | 1 | 852 tok |
| ranxi2001/zero2Agent onefly.top An agent tutorial website for applying to agent R&D positions at major tech companies, cov | 1,026 | Claude Code, Codex, OpenCode | 9 | 1,535 tok |
| pathintegral-institute/mcpm.sh mcpm.sh CLI MCP package manager & registry for all platforms and all clients. Search & configure M | 1,021 | Claude Code, Gemini CLI | 2 | 213 tok |
| bgauryy/octocode octocode.ai Code research platform for AI agents; find, understand, and prove context across your code | 957 | Claude Code, Codex, OpenCode | 2 | 3,171 tok |
| alexknowshtml/smaug Archive your Twitter/X bookmarks to markdown with AI-powered analysis. Supports Claude Cod | 951 | Claude Code | 1 | — |
| OSU-NLP-Group/GUI-Agents-Paper-List osu-nlp-group.github.io Awesome GUI Agent Paper List | 924 | Claude Code, Codex, OpenCode | 2 | 5,208 tok |
| irsdl/webhacklist irsdl.github.io Archive of the Top 10 Web Hacking Techniques - every nominee since 2006, preserved | 912 | Claude Code, Codex | 15 | 2,504 tok |