2,291 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,489Claude Code6,592Data and AI3,693Backend and APIs3,493Languages3,401Planning3,203Git and workflow3,138Code review2,732Memory and context2,360Testing2,339DevOps and cloud2,295Writing and docs2,287
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| noblepayne/mcp-injector HTTP shim for injecting MCP tools into OpenAI-compatible chat completions | 5 | Codex, OpenCode | 1 | 7,776 tok |
| tomwojcik/news-ycombinator-mcp hn-mcp is an MCP server that gives AI agents full access to Hacker News — complete comment | 5 | Claude Code | 1 | — |
| hunter-heidenreich/academic-tools-mcp MCP server giving LLM agents lean, identifier-routed tools to look up, read, and cross-ref | 5 | Claude Code | 4 | 1,007 tok |
| zhousiyao03-cyber/repolayer Cross-repo agent index layer. Stop dumping 400k tokens — index your repos once, query like | 5 | Claude Code | 1 | 2,826 tok |
| dsheard/cobol-o-matic Agentic tool that reverse-engineers COBOL applications into structured requirements, busin | 5 | Claude Code | 5 | 1,998 tok |
| RobinOppenstam/sema-evals robinoppenstam.github.io Open, causal evaluations for content-addressed semantics and multi-agent coordination. | 5 | Codex, OpenCode | 1 | 286 tok |
| retflo/retflo retflo.org Find out if you're right. Structured argumentation protocol for agents, researchers, educa | 5 | Codex, OpenCode | 1 | 3,723 tok |
| JessyTsui/scivly scivly.com Open-source AI research agent for tracking papers, generating summaries, and shipping dail | 5 | Codex, OpenCode | 1 | 618 tok |
| vvsotnikov/astro-bench Can AI agents do real science? Benchmarking AI agents on KASCADE cosmic ray classification | 5 | Claude Code | 1 | 478 tok |
| goeldivyam/truematch Open source AI agent dating network. Matched on who you actually are — not who you think y | 5 | Claude Code | 7 | — |
| xxxxchaos/oh-my-sci AI agent team for medical research: an OpenCode workflow plugin for Chinese clinical resea | 5 | Claude Code, OpenCode | 15 | 898 tok |
| eugene0429/awesome-ai-stack A curated catalog of AI tools — open-source and commercial (SaaS) — plus Claude Code skill | 5 | Claude Code | 1 | — |
| JosephSanjaya/skills Sync and link expert Kotlin, Android, Jetpack Compose, and Gradle guidelines to your AI de | 5 | Claude Code | 1 | — |
| adam-hanna/semantic-search-mcp Give claude code RAG on your codebase | 5 | Claude Code | 1 | 3,899 tok |
| semoji-ai/auto_kairos | 5 | Claude Code, Codex, OpenCode | 20 | 4,892 tok |
| RamboLQX/LLM-Wiki-template | 5 | Claude Code, Codex, OpenCode | 3 | 8,845 tok |
| Steffen025/pag-extract Kongressprogramme als Datei statt 40 Browser-Tabs — liest das öffentliche Programm jedes m | 5 | Claude Code, Codex, GitHub Copilot, OpenCode | 4 | 1,767 tok |
| luke-kerwin/claude-code-setup Personal setup for claude code projects | 5 | Claude Code | 20 | 814 tok |
| ccivlcid/VibeHarness | 5 | Claude Code, Codex, Gemini CLI, OpenCode | 24 | 3,278 tok |
| zjYao36/markdown-claude-code | 5 | Claude Code | 1 | 970 tok |
| didiBlum/interviews-prep | 5 | Claude Code | 1 | — |
| kimmy-sil/empirical-paper-cc A one-stop empirical paper generation Claude Code Skill | Empirical Paper Pipeline for Cla | 5 | Claude Code | 11 | — |
| lucafusarbassini/research-automation scaling up scientific dreams using claude code on steroids | 5 | Claude Code | 3 | 904 tok |
| paperzilla-ai/paperzilla-skills Paperzilla Agent skills for OpenClaw, Claude Cowork/Code, Codex, ... | 5 | Codex, OpenCode | 1 | 33 tok |
| SpillwaveSolutions/cca-exam-prep-multi-agent-researcher | 5 | Claude Code | 1 | 1,393 tok |
| FelixSoderstrom/GIVERNY An agentic workflow I cooked up | 5 | Claude Code, Codex | 23 | 1,330 tok |
| PedroGiudice/lex-vector | 5 | Claude Code | 8 | 893 tok |
| kanazawazawa/copilot-agent-workspace | 5 | Claude Code, Codex, GitHub Copilot, OpenCode | 8 | 3,647 tok |
| shakydata/gdelt-cli docs.neullabs.com The command-line interface for the GDELT Project — built for agents, optimized for automat | 5 | Claude Code | 1 | — |
| johnmwangimegwe/kenya-climate-agent Reasoning Over Earth Engine: An AI Agent for Kenya's Climate Risk | 5 | Codex, OpenCode | 1 | 1,057 tok |
| Iskandeur/bounce-cti bounce.alexandre-pinoteau.fr Autonomous CTI investigation tool. | 5 | Claude Code | 1 | 11,918 tok |
| rafal-fryc/Zwiad regulatory monitoring | 5 | Claude Code | 9 | 4,558 tok |
| lowtidebuild/ebook-writer A multi-agent system that transforms a topic into a professional, print-ready ebook. | 5 | Claude Code, Codex | 11 | 7,158 tok |
| cosdt/PyTorchInsight A PyTorch community cycle insights system | 5 | Claude Code, OpenCode | 6 | — |
| danielrosehill/AI-Decision-Eval-Projects Resource list of AI projects focused on exploring AI as a tool for enhanced decision-makin | 5 | Claude Code | 1 | 146 tok |
| bdhrs/vicaya Pāḷi and Dhamma research tool | 5 | Codex, OpenCode | 1 | 455 tok |
| dungnotnull/herbal-essential-oil-extraction-agent-skill 🌿 Multi-agent AI framework for aromatic plant processing & phytochemical extraction. Eval | 5 | Claude Code | 1 | 1,538 tok |
| s3644/academic-copilot-skills What it does — Research, Write, Review, Orchestrate Who it's for — Grad students, research | 5 | Claude Code, GitHub Copilot | 6 | 269 tok |
| trotsky1997/citeclaw Bun-migrated fork of Citoid with CLI and pipeline updates | 5 | Claude Code, Codex, OpenCode | 2 | 632 tok |
| lvzhaobo/ira Investment Research Assistant | 5 | Codex, OpenCode | 1 | 4,074 tok |
| Dowwie/agent_framework_study An agentic analysis of the most popular agent frameworks as of 12-23-2025 | 5 | Claude Code | 18 | — |
| dungnotnull/arid-region-water-saving-irrigation-agent-skill 🌾💧 Arid-Region Water-Saving Irrigation System Design Engine | Production-grade Claude Co | 5 | Claude Code | 1 | 1,306 tok |
| dungnotnull/black-garlic-fermentation-optimization-agent-skill 🧄 Production-grade multi-agent Claude Skill for black garlic fermentation & functional fo | 5 | Claude Code | 1 | 1,284 tok |
| Horosheff/Excalibur-2-Cloud | 5 | Claude Code, Codex, Cursor, OpenCode | 36 | 880 tok |
| ps-wiki/ps-wiki.github.io ps-wiki.github.io 📖 An open wiki for power systems engineers, researchers, and students | 5 | Claude Code, Codex, OpenCode | 3 | 2,014 tok |
| Gobindpreet9/tsx-stock-research Multi-stage parallelized investment trend research framework for TSX stocks | 5 | Claude Code, Codex, OpenCode | 3 | 3,128 tok |
| raphaelschwinger/torchrl-hydra-template Flexible and scalable template based on torch/rl + Hydra. Fostering rapid and reproducible | 5 | Claude Code, Codex, OpenCode | 2 | 12,500 tok |
| Mtrya/paper-scout Agent-native paper scouting workflow | 5 | Codex, OpenCode | 1 | 2,138 tok |
| TTAWDTT/elegant-researcher-skill A markdown-based skill bundle for end-to-end AI/ML research orchestration. | 5 | Claude Code, Codex, OpenCode | 2 | 1,916 tok |
| dungnotnull/shan-snow-tea-production-agent-skill 🍃⛰️ Shan Tuyết Ancient-Tree Tea Processing Optimization Engine | Production-grade Claude | 5 | Claude Code | 1 | 1,274 tok |