2,315 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents8,442Claude Code6,875Data and AI3,584Git and workflow3,574Backend and APIs3,550Languages3,468Planning3,315Code review2,876Testing2,653DevOps and cloud2,462Writing and docs2,461Memory and context2,373
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| gqy20/genome-mcp pypi.org | 2 | Claude Code | 1 | 2,957 tok |
| Escoto/Coach-Claudio AI training coach for any athlete. Weekly planning, session review, recovery tracking. Pow | 2 | Claude Code | 8 | 1,159 tok |
| jakkapat-kingthong/Deep-research-agent huggingface.co Production-grade agentic research system with schema-enforced verifiable citations to elim | 2 | Claude Code | 1 | 15 tok |
| halvrenofviryel/phionyx-research phionyx.ai Runtime evidence layer for agentic AI — signed audit chain, deterministic gate verdicts wi | 2 | Claude Code | 4 | — |
| cacity/ResearchBrain Windows-first, local-first AI research literature workspace: supports incremental Zotero s | 2 | Claude Code, Codex | 6 | — |
| ajbarea/ariadne ajbarea.github.io One agent tracing a single entity's evidence across graph, relational, and text stores int | 2 | Claude Code, Codex, OpenCode | 2 | 773 tok |
| EndogenAI/dogma Values ingrained, sovereignty sustained — governance framework for endogenous AI workflows | 2 | Claude Code, Codex, OpenCode | 64 | 26,171 tok |
| himanshu231204/mcp-web-search Production-ready MCP server for web search and page extraction with FastAPI, JSON-RPC /mcp | 2 | OpenCode | 2 | — |
| Jeny-Liu/claude-code-biology-research ?? A comprehensive guide to using Claude Code as an AI-powered assistant for computational | 2 | Claude Code | 1 | — |
| karandangi123/leadforge-ai leadforge-ai-weld.vercel.app Human-in-the-loop AI RevOps platform for lead research, website audits, outreach drafting, | 2 | Codex, OpenCode | 1 | 74 tok |
| Lexideck-Technologies/Lexideck2026 A six-agent creative and research federation for OpenAI Codex, with 19 reusable skills and | 2 | Codex, OpenCode | 20 | 876 tok |
| sbauwow/freshcrate.ai freshcrate.ai The open source package directory for AI agents — discover, search, and publish agent tool | 2 | Codex, OpenCode | 1 | 2,366 tok |
| nknishio/LLM-Wiki-Multimodal-TWM-Agent-Skill A drop-in skill that turns PDFs, slide decks, spreadsheets, and images into a persistent, | 2 | Claude Code | 1 | — |
| pasha-school/books-assist | 2 | Codex, OpenCode | 1 | 1,290 tok |
| tasumermaf/the-adversary Agent-driven adversarial paper audit framework | 2 | Claude Code | 22 | 1,295 tok |
| M0h1tkumar/Agentic_ai | 2 | Claude Code, Codex | 3 | — |
| castorini/castorini-skills Claude Code skills for cross-repo Castorini workflows | 2 | Claude Code, Codex, OpenCode | 2 | 397 tok |
| specter119/skills Marketplace-managed Claude Code skills for research, writing, slides, and Typst authoring. | 2 | Codex, OpenCode | 1 | 337 tok |
| petersilberman/personal-reference-claude-code Reference commands and workflows for Claude Code beyond coding | 2 | Claude Code | 9 | — |
| sangwonme/ClaudeCode-For-Researcher Useful claude code skills and hooks for awesome researchers | 2 | Claude Code | 1 | 359 tok |
| Felipe-SO/coarse-ink-claude-code Coarse.ink to run directly in Claude Code as skills. | 2 | Claude Code | 9 | 2,709 tok |
| macgregor/claude-code-toolbox Agents, Skills, Commands, research and other tools for Claude Code, wrapped in Marketplace | 2 | Claude Code | 2 | 848 tok |
| puppylpg/puppylpg.github.io puppylpg wants to say | 2 | Claude Code, Codex, OpenCode | 8 | 5,435 tok |
| wangjialiang678/claude-omo-agentflow Heterogeneous multi-agent orchestration system for Claude Code | 2 | Claude Code | 14 | 1,781 tok |
| ovcharenkoo/agent-energy-arena A game where AI agents build, search for oil, trade, and balance a simulated energy system | 2 | Claude Code | 1 | 260 tok |
| matheusbrramos/ProductFlow Sistema de agentes para Product Managers usando Claude Code | 2 | Claude Code | 21 | 2,445 tok |
| prathambdevx/claude-session-manager Local dashboard to manage Claude Code sessions — browse, search, resume/fork, kanban board | 2 | Claude Code | 3 | 1,179 tok |
| SongHyojun0228/opendart-mcp-server | 2 | Claude Code | 1 | 4,362 tok |
| jayanth-mkv/open-agent-search jayanth-mkv.github.io Self-hosted web search and page extraction for AI agents. Stdio MCP server, HTTP API and P | 2 | GitHub Copilot | 1 | 298 tok |
| brightbear2026/research-agent Evidence-driven deep research agent for Claude Code and Codex/ChatGPT Work, with schema v2 | 2 | Claude Code | 2 | 2,646 tok |
| jursber/VibeCodingLight AI coding status light system — maps Claude Code / Codex status to a physical traffic ligh | 2 | Claude Code | 5 | 328 tok |
| eugeniawang/claude-architect-exam-prep Community-created, first-principles prep course for the Claude Certified Architect – Found | 2 | Claude Code | 46 | 3,324 tok |
| The-Focus-AI/2025-11-20-ai-engineering-code-summit Notes, slides, and analysis from the AI Engineering Code Summit (November 20, 2025) | 2 | Claude Code | 7 | — |
| bailutingyu/OpenByline | 2 | Claude Code | 30 | 2,376 tok |
| dohyun-j-holiday/research_assistant_template | 2 | Codex, OpenCode | 1 | 937 tok |
| haxudev/personal_kb Agent-first local file search knowledge base for Copilot CLI. Ingest files via markitdown, | 2 | Claude Code, GitHub Copilot | 4 | 334 tok |
| hasanrafiq-goog/agy-skills-subagents | 2 | Claude Code, Codex | 4 | — |
| ryanallen/Apply An autonomous agent and modular skill set designed to automate job applications. | 2 | Claude Code | 7 | — |
| nikhilreddy3888/public-api-toolkit nikhilreddy3888.github.io A cross-platform MCP server that turns public APIs into clean, agent-ready tools. | 2 | Claude Code, Codex, Gemini CLI, OpenCode | 3 | 1,472 tok |
| JoeSagera/Spec-Driven-Research | 2 | Codex, OpenCode | 1 | 103 tok |
| don-huron/-- Research about one of the major fake accounts of NWO terrorists | 2 | Codex, OpenCode | 1 | 949 tok |
| Adhikulkarn/safe-search safe-search-neon.vercel.app | 2 | Codex, OpenCode | 1 | 1,194 tok |
| andnp/jax-research-template | 2 | Claude Code, Codex, OpenCode | 7 | 976 tok |
| WebMCP-org/docs Technical documentation for the MCP-B / WebMCP ecosystem | 2 | Claude Code, Codex, OpenCode | 5 | 4,230 tok |
| tamaki-lab/research-workspace | 2 | Claude Code, Codex, OpenCode | 6 | 2,910 tok |
| nickzren/ai-news-agent Daily AI news that matters, delivered to your inbox. Free, no ads. | 2 | Claude Code, Codex, OpenCode | 2 | 1,153 tok |
| RintaroMasaoka/daily-arxiv | 2 | Codex, OpenCode | 2 | 2,692 tok |
| microsoft/TWL400-Using-AI-to-Secure-the-Modern-SOC | 2 | Codex, GitHub Copilot, OpenCode | 2 | 4,174 tok |
| rxdaozhang/product-reverse | 2 | Codex, OpenCode | 1 | 296 tok |
| guoshaoyang-pku/ngram-gap-lab Minimal clean reproduction of n-gram value memory induced replay-specific train/val gap on | 2 | Codex | 3 | — |