1,768 projects whose own agent configuration covers research. These are not mods to install — they are how the maintainers of these repositories tell an agent what to do, and what to avoid.
All projects Building agents7,374Claude Code6,573Data and AI3,706Backend and APIs3,486Languages3,398Planning3,181Git and workflow3,100Code review2,701Memory and context2,354Testing2,311DevOps and cloud2,282Writing and docs2,269
Any agent Claude CodeCodexOpenCodeGitHub CopilotGemini CLICursorWindsurfKiro
| Project | Stars | Configures | Files | Always loaded |
|---|---|---|---|---|
| EBISPOT/ols4 ebi.ac.uk The EMBL-EBI Ontology Lookup Service (OLS) | 101 | Claude Code, Codex, OpenCode | 5 | 417 tok |
| UmairBaig8/okf-generator OKF v0.1 knowledge bundle generator — Claude skill + OpenCode integration | 101 | Claude Code, Codex, GitHub Copilot, Cursor, OpenCode | 5 | 2,399 tok |
| zhangjunmengyang/quant-research-platform quant research mcp backend | 101 | Claude Code, Codex, OpenCode | 2 | 3,569 tok |
| DSB-117/brainblast npmjs.com Predict the silent integration traps an AI agent would ship (zero-revenue configs, auth by | 100 | Claude Code | 2 | — |
| firecrawl/skills | 100 | Claude Code, Codex, OpenCode | 2 | 361 tok |
| jameesy/foundry-vault An agentic Obsidian vault: you curate, the agent compiles. | 99 | Claude Code | 5 | 2,072 tok |
| xd-liu/AutoResearch-Idea | 99 | Claude Code | 11 | 2,294 tok |
| zhiyuzi/Signex signex.fyi Personal intelligence agent powered by Claude Code. Describe what to watch, it collects, a | 98 | Claude Code | 35 | 3,066 tok |
| eunomia-bpf/ActPlane eunomia.dev eBPF Information Flow Enforcement for AI Agent safety, security and effectiveness | 98 | Claude Code, Codex, OpenCode | 6 | 2,205 tok |
| lxinfei5/research-os Research capability for coding agents: multi-source corroboration, active discovery, logic | 97 | Claude Code, Codex, OpenCode | 11 | 1,146 tok |
| ingo-eichhorst/Irrlicht Claude Code session lights in your macOS menu bar — 🟣 🟠 🟢 ✦ | 97 | Claude Code, Codex, OpenCode | 18 | 3,923 tok |
| GoatWang/CCStockWorkEnv | 95 | Claude Code | 18 | 4,392 tok |
| frankchu91/mindbase-llm-wiki frankchu91.github.io Karpathy's LLM Wiki idea as a product — an AI that builds and maintains a markdown wiki fr | 95 | Claude Code | 1 | 3,400 tok |
| jyjeanne/okf-rs A fast, open-source Rust toolkit for generating, validating and serving Open Knowledge For | 94 | Claude Code, Codex, GitHub Copilot, OpenCode | 3 | 434 tok |
| 8enSmith/mcp-open-library A Model Context Protocol (MCP) server for the Internet Archive's Open Library API that ena | 93 | Claude Code | 1 | 2,654 tok |
| capitalparser/notebooklm-wiki-pipeline Turn Google Drive PDFs into Obsidian wiki notes via NotebookLM MCP without loading full PD | 93 | Claude Code | 1 | 571 tok |
| yavorsky/unbuilt.app unbuilt.app Free and Open Source technology detection tool | 92 | Claude Code, Codex, OpenCode | 3 | 1,097 tok |
| joemccann/x-bookmarks-pipeline A multi-LLM Python pipeline that fetches your X (Twitter) bookmarks, classifies them by ca | 92 | Claude Code | 1 | 1,792 tok |
| cyanheads/clinicaltrialsgov-mcp-server npmjs.com Search ClinicalTrials.gov trials, retrieve study details and results, and match patients t | 91 | Claude Code, Codex, OpenCode | 2 | 11,808 tok |
| IlyaGusev/academia_mcp smithery.ai Academia MCP server: Tools for automatic scientific research | 91 | Claude Code | 1 | 2,701 tok |
| dennisonbertram/lgrep Local semantic code search CLI with multi-language support | 88 | Claude Code, Codex, OpenCode | 2 | 2,150 tok |
| prof-little-bear/cc-equity-research Turn Claude Code into an equity-research agent: 24 analysis skills (Anthropic's open-sourc | 88 | Claude Code | 5 | 2,892 tok |
| disnet/skyreader skyreader.app An RSS reader for the AT Protocol | 88 | Claude Code, Codex, OpenCode | 3 | 3,417 tok |
| VirtusLab/cellar CLI tool for coding agents and developers to query the public API of any Maven JVM depende | 88 | Claude Code | 1 | 1,256 tok |
| QuantumBFS/sci-brain Brain storming like a senior research scientist | 88 | Claude Code, Codex, OpenCode | 3 | 4,014 tok |
| microsoft/Microsoft-AI-Decision-Framework Evidence-based decision framework for selecting the right Microsoft AI technology (M365 Co | 88 | Claude Code, GitHub Copilot | 3 | 5,188 tok |
| Tako-Research/TakoVM tako-research.github.io A secure file system for your agents to execute code | 87 | Claude Code | 3 | 926 tok |
| linzhe001/Harness-Research | 86 | Claude Code, Codex | 26 | — |
| fabio-rovai/brain-in-the-fish Score any document. Prove every claim. | 86 | Claude Code | 1 | 569 tok |
| sysevol-ai/CodeNib codenib.ai A multi-view data system for serving repository context to coding agents. | 85 | Claude Code, Codex, OpenCode | 2 | 2,803 tok |
| nealcaren/social-data-analysis Claude Code plugins for quantitative and qualitative sociological research | 84 | Claude Code | 1 | 3,331 tok |
| Lambenthan/empiricalwiki AI knowledge base for empirical research in economics and management — a complete pipeline | 82 | Claude Code, Codex, OpenCode | 31 | 4,874 tok |
| yukukotani/mcp-gemini-google-search MCP server for Google Search integration using Gemini's built-in search capabilities | 82 | Claude Code | 1 | 588 tok |
| fivetaku/llm-wiki A persistent Markdown knowledge-base template where Claude Code synthesizes and maintains | 82 | Claude Code | 7 | 4,213 tok |
| alfadur7/llm-wiki-newsroom alfadur7.github.io Harness engineering applied to knowledge production: a self-evolving multi-agent newsroom | 82 | Claude Code, Codex, Gemini CLI, OpenCode | 28 | 7,701 tok |
| tobyilee/book-writer Automated book-writing harness with Toby-style voice (11 agents + 10 skills, EPUB output) | 81 | Claude Code | 30 | 6,042 tok |
| oguzcankaraman/Watch_Youtube_Skill | 81 | Claude Code | 3 | 901 tok |
| luffysolution-svg/obsidian-vault-mcp luffysolution-svg.github.io obsidian-vault-mcp | 80 | Claude Code, Codex, OpenCode | 2 | 780 tok |
| dragosroua/claude-assess-decide-do-mega-prompt dragosroua.com First human cognitive framework integrated into an LLM. Claude learns to detect if you're | 79 | Claude Code | 9 | 584 tok |
| acogood/spain-dnv-consultant A personal LLM consultant for Spain's digital nomad residence permit (Ley 14/2013). Conver | 79 | Claude Code, Codex, OpenCode | 16 | 3,620 tok |
| sverklo/sverklo sverklo.com Repo memory for coding agents. Local-first MCP for Claude Code, Cursor, Windsurf, and Code | 79 | Claude Code | 1 | 406 tok |
| leehanchung/bing-search-mcp MCP Server for Bing Search API | 79 | Claude Code | 1 | 1,294 tok |
| riemannzeta/patent_mcp_server MCP Server for USPTO data | 78 | Claude Code, Codex, OpenCode | 2 | 3,475 tok |
| jaylfc/taosmd Local-first AI memory — runs offline on any machine with 8 GB+ RAM (SBC, mini PC, laptop, | 77 | Claude Code, Codex, OpenCode | 3 | 3,177 tok |
| vakovalskii/ontoship md+git knowledge base: FTS5 search (bm25+trigram/fuzzy), HTML+graph, code-ontology linter, | 77 | Claude Code | 1 | 434 tok |
| idoforgod/Sermon-Assistant-AgenticWorkflow Sermon assistant AI agent workflow — based on AgenticWorkflow DNA | 74 | Claude Code, Codex, GitHub Copilot, Gemini CLI, OpenCode | 56 | 28,475 tok |
| ericgandrade/claude-superskills 18 Universal AI Skills for Claude Code, GitHub Copilot & 6 more platforms. Meta/orchestrat | 74 | Claude Code, Codex, GitHub Copilot, Gemini CLI, OpenCode | 4 | 8,395 tok |
| appreply-co/mcp-appstore appreply.co This is an MCP server that provides tools to LLMs for searching and analyzing apps from bo | 72 | Claude Code | 1 | 270 tok |
| fei0810/bear-research-skills Some of my ideas and methods from academic research work, distilled into Agent Skills and | 71 | Claude Code | 1 | 793 tok |
| bradleygolden/hexdocs-mcp hexdocs.pm Semantic search for Hex documentation, right in your editor ✨ | 70 | Claude Code | 1 | 2,253 tok |