Local org-roam-style knowledge graph (SQLite, stdlib Python) with a 2D/3D web UI, MCP server, arXiv loop templates, and a self-contained paper-explainer skill.
2 files for Codex, OpenCode and Claude Code: mindgap AGENTS.md, mindgap CLAUDE.md — 1,530 tokens loaded in every session.
AGENTS.md A 1,314 tok CLAUDE.md A 216 tok These files are grburgess/mindgap's own configuration — they tell Codex, OpenCode and Claude Code how to work on this repository, so they are not mods to install elsewhere. Copy one as a starting point and replace the parts that are about this project.