BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing
These files are Softleif/seqair's own configuration. They tell Claude Code and Codex how to work on this repository, so they are not mods to install elsewhere. Copy one as a starting point and replace the parts that are about this project.
CLAUDE.md A 3,002 tok .claude/settings.json A — .claude/settings.json A — .claude/settings.json A — .agents/skills/tracey/SKILL.md A 51 tok .agents/agents/rust-refactor.md A 34 tok