u9401066/pubmed-search-mcp: how it configures its agents

u9401066/pubmed-search-mcp

MCP SDK v2 server for PubMed and multi-source biomedical research, with resilient search, full text, citations, and tenant-safe deployment.

These files are u9401066/pubmed-search-mcp's own configuration. They tell Claude Code, Codex, GitHub Copilot and OpenCode how to work on this repository, so they are not mods to install elsewhere. Copy one as a starting point and replace the parts that are about this project.

Instructions

pubmed-search-mcp copilot-instructions.md .github/copilot-instructions.md A 7,734 tok
pubmed-search-mcp AGENTS.md AGENTS.md A 664 tok

Skills

changelog-updater .claude/skills/changelog-updater/SKILL.md A 41 tok
code-refactor .claude/skills/code-refactor/SKILL.md A 50 tok
code-reviewer .claude/skills/code-reviewer/SKILL.md A 46 tok
ddd-architect .claude/skills/ddd-architect/SKILL.md A 45 tok
git-doc-updater .claude/skills/git-doc-updater/SKILL.md A 44 tok
git-precommit .claude/skills/git-precommit/SKILL.md A 66 tok
memory-checkpoint .claude/skills/memory-checkpoint/SKILL.md A 50 tok
memory-updater .claude/skills/memory-updater/SKILL.md A 53 tok
pdf-asset-extractor .claude/skills/pdf-asset-extractor/SKILL.md A 84 tok
pipeline-persistence .claude/skills/pipeline-persistence/SKILL.md A 49 tok
project-init .claude/skills/project-init/SKILL.md A 36 tok
pubmed-export-citations .claude/skills/pubmed-export-citations/SKILL.md A 43 tok
pubmed-fulltext-access .claude/skills/pubmed-fulltext-access/SKILL.md A 45 tok
pubmed-gene-drug-research .claude/skills/pubmed-gene-drug-research/SKILL.md A 64 tok
pubmed-mcp-tools-reference .claude/skills/pubmed-mcp-tools-reference/SKILL.md A 39 tok
pubmed-multi-source-search .claude/skills/pubmed-multi-source-search/SKILL.md A 44 tok
pubmed-paper-exploration .claude/skills/pubmed-paper-exploration/SKILL.md A 56 tok
pubmed-pico-search .claude/skills/pubmed-pico-search/SKILL.md A 52 tok
pubmed-quick-search .claude/skills/pubmed-quick-search/SKILL.md A 40 tok
pubmed-research-chronicle .claude/skills/pubmed-research-chronicle/SKILL.md A 82 tok
pubmed-systematic-search .claude/skills/pubmed-systematic-search/SKILL.md A 54 tok
readme-i18n .claude/skills/readme-i18n/SKILL.md A 44 tok
readme-updater .claude/skills/readme-updater/SKILL.md A 40 tok
roadmap-updater .claude/skills/roadmap-updater/SKILL.md A 43 tok
test-generator .claude/skills/test-generator/SKILL.md A 58 tok
tool-sync .claude/skills/tool-sync/SKILL.md A 52 tok
academic-figure-drawing-harness .codex/skills/academic-figure-drawing-harness/SKILL.md A 44 tok

Agents

architect .github/agents/architect.agent.md A 44 tok
ask .github/agents/ask.agent.md A 35 tok
asset-aware-document .github/agents/asset-aware-document.agent.md A 22 tok
audit .github/agents/audit.agent.md A 44 tok
code .github/agents/code.agent.md A 43 tok
context-loader .github/agents/context-loader.agent.md A 40 tok
debug .github/agents/debug.agent.md A 33 tok
deep-thinker .github/agents/deep-thinker.agent.md A 45 tok
orchestrator .github/agents/orchestrator.agent.md A 58 tok
research .github/agents/research.agent.md A 25 tok
researcher .github/agents/researcher.agent.md A 41 tok
review-panel .github/agents/review-panel.agent.md A 49 tok
reviewer-anthropic .github/agents/reviewer-anthropic.agent.md A 29 tok
reviewer-google .github/agents/reviewer-google.agent.md A 28 tok
reviewer-openai .github/agents/reviewer-openai.agent.md A 26 tok
test-runner .github/agents/test-runner.agent.md A 42 tok