AndyZhuang/Opentest

Claw-like Agent for bioinformatics

22Stars on the repository
200Mods indexed here, across every type
6mo agoLast push, which is what freshness is scored on
MITLicence, which decides whether bodies are shown

deepchem

193

AndyZhuang/Opentest

Skill Claude CodeCodex needs its repo

Molecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featurization options and MoleculeNet benchmarks. Best for quick experiments with pre-trained models, diverse molecular representations. For graph-first…

not rated 22 6mo ago A 78 tokens copy · 89% MIT

diffdock

194

AndyZhuang/Opentest

Skill Claude CodeCodex needs its repo

Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction.

not rated 22 6mo ago A 40 tokens copy · 86% MIT

drug-discovery-search

195

AndyZhuang/Opentest

Skill Claude CodeCodex

End-to-end drug discovery platform combining ChEMBL compounds, DrugBank, targets, and FDA labels. Natural language powered by Valyu.

not rated 22 6mo ago B 33 tokens copy · 100% MIT

drug-labels-search

196

AndyZhuang/Opentest

Skill Claude CodeCodex

Search FDA drug labels with natural language queries. Official drug information, indications, and safety data via Valyu.

not rated 22 6mo ago B 27 tokens copy · 100% MIT

drugbank-database

197

AndyZhuang/Opentest

Skill Claude CodeCodex

Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction…

not rated 22 6mo ago A 84 tokens copy · 95% MIT

drugbank-search

198

AndyZhuang/Opentest

Skill Claude CodeCodex

Search DrugBank comprehensive drug database with natural language queries. Drug mechanisms, interactions, and safety data powered by Valyu.

not rated 22 6mo ago B 28 tokens copy · 100% MIT

fda-database

199

AndyZhuang/Opentest

Skill Claude CodeCodex needs its repo

Query openFDA API for drugs, devices, adverse events, recalls, regulatory submissions (510k, PMA), substance identification (UNII), for FDA regulatory data analysis and safety research.

not rated 22 6mo ago A 43 tokens copy · 86% MIT

medchem

200

AndyZhuang/Opentest

Skill Claude CodeCodex needs its repo

Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering.

not rated 22 6mo ago A 39 tokens copy · 91% MIT

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