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aristoteleo/PantheonOS

A general, evolvable, and distributed agent framework & harness for data science.

Open on GitHub pantheonos.stanford.edu
485Stars on the repository
31Mods indexed here, across every type
todayLast push, which is what freshness is scored on
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Protein Structures — AlphaFold & PDB

25

aristoteleo/PantheonOS

Skill Claude CodeCodex

Obtain and predict protein 3D structures — fetch AlphaFold predicted models from the AlphaFold DB, experimental structures from the RCSB PDB, or predict a novel sequence with ColabFold — and visualise them in the Mol desktop app.

not rated 485 +3 today B SkillSpector: warn 63 tokens original BSD-2-Clause

Virtual Embryo — atlas data + knowledge graph

26

aristoteleo/PantheonOS

Skill Claude CodeCodex

Query the Virtual Embryo knowledge graph (mouse/human developmental biology: genes, anatomy, Theiler/Carnegie stages, gene expression, diseases, papers) and its 3D atlas catalog (anatomical OPT/light-sheet volumes + 3D spatial- transcriptomics datasets), and visualise those datasets in 3D with the volume3d / spatial3d…

not rated 485 +3 today A SkillSpector: warn 170 tokens original BSD-2-Clause

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