🔬🦞 A self-evolving AI research colleague for scientists. 285 skills, zero hallucination, persistent memory.
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Skill Claude CodeCodex needs its repo
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. Automatically detects file type and generates detailed markdown reports with…
Skill Claude CodeCodex
Verify scientific claims, political statements, and environmental assertions against evidence.
Skill Claude CodeCodex
Helps users discover and install agent skills when they ask questions like "how do I do X", "find a skill for X", "is there a skill that can...", or express interest in extending capabilities. This skill should be used when the user is looking for functionality that might exist as an installable skill.
Skill Claude CodeCodex
Framework for computational fluid dynamics simulations using Python. Use when running fluid dynamics simulations including Navier-Stokes equations (2D/3D), shallow water equations, stratified flows, or when analyzing turbulence, vortex dynamics, or geophysical flows. Provides pseudospectral methods with FFT, HPC…
Skill Claude CodeCodex
Analyzes food science topics including nutritional composition, food chemistry, food safety hazard analysis, sensory evaluation design, and food processing optimization; trigger when users discuss nutrients, food additives, HACCP, shelf life, or food product development.
Skill Claude CodeCodex
Gemini CLI for one-shot Q&A, summaries, and generation.
Skill Claude CodeCodex
Query NCBI Gene via E-utilities/Datasets API. Search by symbol/ID, retrieve gene info (RefSeqs, GO, locations, phenotypes), batch lookups, for gene annotation and functional analysis.
Skill Claude CodeCodex
Generate or edit images using AI models (FLUX, Nano Banana 2). Use for general-purpose image generation including photos, illustrations, artwork, visual assets, concept art, and any image that is not a technical diagram or schematic. For flowcharts, circuits, pathways, and technical diagrams, use the…
Skill Claude CodeCodex
Performs genomics analyses including gene expression profiling, BLAST sequence alignment, GWAS interpretation, variant calling, and genome assembly tasks; trigger when the user mentions DNA/RNA sequences, SNPs, gene panels, or comparative genomics.
Skill Claude CodeCodex
Orchestrates a genomics analysis workflow from gene query through expression analysis to pathway enrichment. Use when investigating gene function, analyzing expression data, or performing pathway-level interpretation. NOT for pure protein structure modeling or drug-target interaction analysis.
Skill Claude CodeCodex
Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.
Skill Claude CodeCodex
Geospatial and climate data analysis with geopandas and xarray. Use when: (1) geographic vector data analysis, (2) climate and weather NetCDF data, (3) spatial joins and overlay operations, (4) map visualization, (5) CRS transformations and area calculations. NOT for: satellite imagery ML (use rasterio/torchgeo)…
Skill Claude CodeCodex
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transformations, spatial joins, overlay operations, choropleth mapping, or any task involving…
Skill Claude CodeCodex
Performs geospatial data analysis including GIS operations, spatial statistics, remote sensing image processing, geocoding, and cartographic visualization; trigger when users discuss maps, coordinates, satellite imagery, spatial patterns, or geographic data.
Skill Claude Code
Fetch GitHub issues, spawn sub-agents to implement fixes and open PRs, then monitor and address PR review comments. Usage: /gh-issues [owner/repo] [--label bug] [--limit 5] [--milestone v1.0] [--assignee @me] [--fork user/repo] [--watch] [--interval 5] [--reviews-only] [--cron] [--dry-run] [--model glm-5]…
Skill Claude CodeCodex
Search GIF providers with CLI/TUI, download results, and extract stills/sheets.
Skill Claude CodeCodex
GitHub operations via gh CLI: issues, PRs, CI runs, code review, API queries. Use when: (1) checking PR status or CI, (2) creating/commenting on issues, (3) listing/filtering PRs or issues, (4) viewing run logs. NOT for: complex web UI interactions requiring manual browser flows (use browser tooling when available)…
Skill Claude CodeCodex
Query gnomAD (Genome Aggregation Database) for population allele frequencies, variant constraint scores (pLI, LOEUF), and loss-of-function intolerance. Essential for variant pathogenicity interpretation, rare disease genetics, and identifying loss-of-function intolerant genes.
Skill Claude CodeCodex
Google Workspace CLI for Gmail, Calendar, Drive, Contacts, Sheets, and Docs.
Skill Claude CodeCodex
Query Google Places API (New) via the goplaces CLI for text search, place details, resolve, and reviews. Use for human-friendly place lookup or JSON output for scripts.
Skill Claude CodeCodex
Assists with research grant proposal writing including specific aims, significance framing, innovation articulation, approach design, and budget justification for NIH, NSF, ERC, and other funding agencies; trigger when users discuss grant proposals, funding applications, or research funding strategy.
Skill Claude CodeCodex
Host security hardening and risk-tolerance configuration for OpenClaw deployments. Use when a user asks for security audits, firewall/SSH/update hardening, risk posture, exposure review, OpenClaw cron scheduling for periodic checks, or version status checks on a machine running OpenClaw (laptop, workstation, Pi, VPS).
Skill Claude CodeCodex
CLI to manage emails via IMAP/SMTP. Use himalaya to list, read, write, reply, forward, search, and organize emails from the terminal. Supports multiple accounts and message composition with MML (MIME Meta Language).
Skill Claude CodeCodex
Structured hypothesis generation workflow. Use when: user needs to formulate testable scientific hypotheses from observations, gaps, or preliminary data. NOT for: testing hypotheses or running experiments.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: