paper-graph

A research report builder that traces how ideas in an academic field developed from earlier problems to later solutions, using diagrams and written explanations.

In plain words
What is it for?
It is for mapping a field's history, tracing a paper's influences and follow-ups, building citation trees, and showing the evolution of ideas.
Why use it?
It makes relationships between papers and successive improvements easier to follow than a simple list of citations.

Skill for Claude CodeCodex

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add skills/camusgit/evoquant/paper-graph
Any agent
npx skills add CamusGIT/EvoQuant --skill paper-graph
Clone the repo
git clone --depth 1 https://github.com/CamusGIT/EvoQuant

Made for: Claude Code, Codex.

Per session 197 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 6,049 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5 $0.00197 $0.06049
Opus 5 $0.00098 $0.03024
Sonnet 5 $0.00039 $0.01210
Haiku 4.5 $0.00020 $0.00605

Measured 2d ago against content hash b41f3f0c737c, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

paper-graph scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 2d ago.

The scan reads SKILL.md. This mod also ships 9 executable files (scripts/cli.py, scripts/config.py, scripts/deepxiv_client.py, …), listed below but not scanned — reading those needs a real analyzer, not pattern matching.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

EvoQuant/skills/paper-graph/SKILL.md · 398 lines

How it starts

The opening of the file, as written. The whole thing — 398 lines — stays where its author put it; the contents beside it link to each section on GitHub.

Paper Graph

Build a Markdown report with embedded Mermaid diagrams showing how research on a user-specified topic (or paper) evolved — clustered into challenges → solutions and traced as per-solution evolution paths.

The skill has no outbound LLM dependency. The host agent provides all LLM calls; the skill provides deterministic data fetchers (S2 / DeepXiv), prompt templates, markdown parsers, and Mermaid renderers. Run the runbook below step-by-step.

When to Use This Skill

Trigger when the user asks something like:

  • "Show me the history of " / "How did evolve?"
  • "Where does stem from?" / "What did build on?"
  • "What are significant improvements / follow-ups to ?"
  • "Trace the lineage of ideas in " / "Give me a literature taxonomy of "
  • "Citation tree of " / "Idea trace of "

Skip when:

  • The user just wants a one-paper summary or single search hit (no relational/evolutionary aspect).
  • The request is for non-academic citation work.
  • The user explicitly wants a plain bibliography rather than a graph.

Inputs and Output

Inputs:

  • A research query: a topic, a seed paper title/citation, or a hybrid. Free-form text.
  • Output path (required): path for the final Markdown report. If not given, ask before running.
  • (Optional) number of papers to fetch (--n flag on fetch_papers). Default 10.
  • (Optional) Mermaid theme light or dark (--theme on render steps, or MERMAID_THEME env). Default light.

Output: a single Markdown file at the user-specified path with these sections:

  1. Research goal (extracted from the query)
  2. High-level taxonomy — one Mermaid graph: root → challenges → solutions → paper references
  3. Per-solution evolution paths — one Mermaid graph per solution, showing paper-to-paper "evolution from" edges, evolution points, open challenges
  4. Paper appendix — the numbered list of papers with title / year / authors / abstract / conclusion excerpt

Read the full file on GitHub · 398 lines

Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 2d ago First seen · 398 lines · 197 tokens per session scan A b41f3f0c737c

Subscribe to this mod's changes

paper-graph is a skill published in the GitHub repository CamusGIT/EvoQuant (215 stars, last pushed 15d ago), licensed Apache-2.0. It adds 197 tokens to every session and 6,049 once invoked, about $0.0010 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.

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