deepnote

deepnote is a skill for Claude Code, Codex from deepelementlab/jupyter-studio. It costs 25 tokens per session (299 once invoked), scanned A, original, Apache-2.0.

A persistent knowledge base made from linked Markdown pages, source records, indexes, and history. DeepNote helps an agent store information, find it later, and track how pages and links change.

In plain words
What is it for?
Use it to save research and project knowledge, query stored information, check the wiki for problems, inspect connections between topics, and review past changes.
Why use it?
It reduces the need to rediscover information between sessions and helps catch incomplete links, missing metadata, or outdated page structure.

Skill for Claude CodeCodex

Install

Getting it into your agent

One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.

agentmods
npx agentmods add skills/deepelementlab/jupyter-studio/deepnote
Any agent
npx skills add deepelementlab/jupyter-studio --skill deepnote
Clone the repo
git clone --depth 1 https://github.com/deepelementlab/jupyter-studio

Made for: Claude Code, Codex.

Wrote this? Show the measurements

A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.

agentmods badge for deepnote

README.md
[![agentmods](https://agentmods.dev/badge/skills/deepelementlab/jupyter-studio/deepnote.svg)](https://agentmods.dev/skills/deepelementlab/jupyter-studio/deepnote)
Your own site
<a href="https://agentmods.dev/skills/deepelementlab/jupyter-studio/deepnote"><img src="https://agentmods.dev/badge/skills/deepelementlab/jupyter-studio/deepnote.svg" alt="Measured on agentmods" height="20"></a>
Per session 25 Skills are progressive disclosure: only the name and description are preloaded; the body loads when the skill is used.
When invoked 299 The whole file, excluding the scripts and references it only reads on demand.
Security scan A 0 findings. Scan, not verified.
Origin original No closer match found in the catalogue.
Token cost

What it costs to keep this loaded

Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.

ModelPer sessionOnce invoked
Fable 5 $0.00025 $0.00299
Opus 5 $0.00013 $0.00150
Sonnet 5 $0.00005 $0.00060
Haiku 4.5 $0.00003 $0.00030

Measured 4d ago against content hash bd3eb8119c11, method: parsed. Prices are Anthropic first-party input rates as of 2026-08-30, from the pricing page.

Security

Grade A, and why

deepnote scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured 4d ago.

A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.

Nothing flagged

None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.

clawcode/clawcode/plugin/builtin_plugins/clawcode-skills/skills/deepnote/SKILL.md · 36 lines

What it actually says

DeepNote Wiki

DeepNote is the improved llm-wiki implementation for ClawCode.

Quick Start

  1. Call wiki_orient to load schema, index, and recent logs.
  2. Call wiki_ingest to save sources and update pages.
  3. Call wiki_query to retrieve knowledge.
  4. Call wiki_lint regularly to prevent drift.
  5. Use wiki_link / wiki_history for maintenance and traceability.

Storage Layout

  • Root path from config: deepnote.path (default ~/deepnote)
  • Immutable sources in raw/
  • Compiled pages in entities/, concepts/, comparisons/, queries/
  • Metadata in .deepnote/ (graph, history, index)

Improvements vs llm-wiki

  • Dedicated tools instead of pure convention.
  • Structured lint checks for frontmatter, links, and schema taxonomy.
  • Persistent link graph and operation history.
  • Hybrid retrieval path with optional vector-store backend.
Changes

What this file has done since we first saw it

Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.

  1. 4d ago First seen · 36 lines · 25 tokens per session scan A bd3eb8119c11

Subscribe to this mod's changes

deepnote is a skill published in the GitHub repository deepelementlab/jupyter-studio (53 stars, last pushed 3mo ago), licensed Apache-2.0. It adds 25 tokens to every session and 299 once invoked, about $0.0001 per session on Opus 5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-08-30.