The largest open-source medical AI skills library for OpenClaw🦞.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-genome-tracks" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-ggplot2-fundamentals" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-heatmaps-clustering" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-interactive-visualization" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-multipanel-figures" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-specialized-omics-plots" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-upset-plots" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-data-visualization-volcano-customization" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold change shrinkage. Use when performing DE analysis with DESeq2.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Perform differential expression analysis using edgeR in R/Bioconductor. Use for analyzing RNA-seq count data with the quasi-likelihood F-test framework, creating DGEList objects, normalization, dispersion estimation, and statistical testing. Use when performing DE analysis with edgeR.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR. Use for identifying significant genes, applying multiple testing corrections, adding gene annotations, and preparing results for downstream analysis. Use when filtering and exporting DE analysis results.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Visualize differential expression results using DESeq2/edgeR built-in functions. Covers plotMA, plotDispEsts, plotCounts, plotBCV, sample distance heatmaps, and p-value histograms. Use when visualizing differential expression results.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Remove batch effects from RNA-seq data using ComBat, ComBat-Seq, limma removeBatchEffect, and SVA for unknown batch variables. Use when correcting batch effects in expression data.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Analyze time-series RNA-seq data using limma voom with splines, maSigPro, and ImpulseDE2. Identify genes with dynamic expression patterns. Use when analyzing time-series or longitudinal expression data.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Detects differential alternative splicing between conditions using rMATS-turbo (BAM-based) or SUPPA2 diffSplice (TPM-based). Reports events with FDR-corrected significance and delta PSI effect sizes. Use when comparing splicing patterns between treatment groups, tissues, or disease states.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-duplicate-handling" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-entrez-fetch" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-entrez-link" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Skill "bio-entrez-search" from FreedomIntelligence/OpenClaw-Medical-Skills, covering copyright notice, copyright (c) 2026 md babu mia, phd, all rights reserved, this code is proprietary and confidential and provenance: authenticated by md babu mia.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Detect and track antimicrobial resistance genes using AMRFinderPlus and ResFinder with epidemiological context. Monitor resistance trends and identify emerging resistance patterns. Use when screening genomes for AMR genes or tracking resistance in surveillance programs.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Perform multi-locus sequence typing (MLST), core genome MLST, and SNP-based strain typing for bacterial isolate characterization using mlst and chewBBACA. Use when identifying strain types, tracking outbreak clones, or characterizing bacterial isolates.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Construct time-scaled phylogenies and infer evolutionary dynamics using TreeTime and BEAST2 for outbreak analysis. Estimate divergence times, molecular clock rates, and ancestral states. Use when dating outbreak origins, estimating transmission rates, or building time-calibrated trees.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Infer pathogen transmission networks and identify likely transmission pairs using TransPhylo and outbreak reconstruction algorithms. Estimate who-infected-whom from genomic and epidemiological data. Use when investigating outbreak transmission chains or identifying superspreaders.
FreedomIntelligence/OpenClaw-Medical-Skills
Skill Claude CodeCodex
Assign pathogen lineages and track variants using Nextclade and pangolin for viral surveillance. Monitor variant prevalence and identify emerging variants of concern. Use when classifying viral sequences, tracking lineage dynamics, or monitoring for variants of concern.
At most 3 mods per repository are shown here, and a mod shipped inside a plugin is left to that plugin's page — the rest are on their repository pages: