JimLiu/science-skills

226Stars on the repository
29Mods indexed here, across every type
2mo agoLast push, which is what freshness is scored on
noneNo LICENSE: all rights reserved, so bodies are not copied

scvi-tools

25

JimLiu/science-skills

Skill Claude CodeCodex

Probabilistic single-cell RNA-seq with scvi-tools — scVI for a batch-corrected latent space, scANVI for semi-supervised label transfer, and Bayesian differential expression. Reach for this skill to integrate scRNA-seq batches, embed cells for clustering, transfer annotations from a reference onto a query, or score…

not rated 226 2mo ago A 100 tokens

self-awareness

26

JimLiu/science-skills

Skill Claude CodeCodex

Claude Science's own session database schema and SDK surface for introspection via host.query(). Load this when you need to query your own conversation history, token usage, cost accounting, execution log, or artifact metadata beyond what host.frames()/host.artifacts() provide — e.g. "how many tokens has this session…

not rated 226 2mo ago A 121 tokens

skill-creator

27

JimLiu/science-skills

Skill Claude CodeCodex

Create new skills, modify and improve existing skills, and measure skill performance. Use when users want to create a skill from scratch, edit, or optimize an existing skill, run evals to test a skill, benchmark skill performance with variance analysis, or optimize a skill's description for better triggering accuracy.

not rated 226 2mo ago A 64 tokens

solublempnn

28

JimLiu/science-skills

Skill Claude CodeCodex

Inverse-fold a backbone with SolubleMPNN — ProteinMPNN retrained on a soluble-PDB subset (Dauparas et al. 2022) — for sequences biased toward cytosolic expression and reduced aggregation. Reach for this skill when designs from vanilla ProteinMPNN are aggregating or going to inclusion bodies, when redesigning a…

not rated 226 2mo ago A 96 tokens

JimLiu/science-skills

Skill Claude CodeCodex

Call a registered model endpoint over its native HTTP API from the endpoint's scoped inference kernel (BASEURL preloaded). Load once a task needs predictions from a registered model endpoint.

not rated 226 2mo ago A 40 tokens

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