Getting it into your agent
One page per mod, every tool's command on it. A separate URL per tool would split the same page into five that compete with each other.
npx skills add Merck/ReactiveDynamics.jl --skill rd-doctorgit clone --depth 1 https://github.com/Merck/ReactiveDynamics.jlWrote this? Show the measurements
A badge with what this costs and how it scanned, read live from this page, so it follows the numbers instead of freezing them. Markdown for a README, HTML for a documentation site or a project page.
[](https://agentmods.dev/skills/merck/reactivedynamics.jl/rd-doctor)<a href="https://agentmods.dev/skills/merck/reactivedynamics.jl/rd-doctor"><img src="https://agentmods.dev/badge/skills/merck/reactivedynamics.jl/rd-doctor/github.svg" alt="Measured on agentmods" height="20"></a>Or the 80×15 button, for a site that already has a row of RSS and ATOM ones. Only the verdict fits; the numbers stay here.
<a href="https://agentmods.dev/skills/merck/reactivedynamics.jl/rd-doctor"><img src="https://agentmods.dev/badge/skills/merck/reactivedynamics.jl/rd-doctor.svg" alt="Reviewed on agentmods" width="80" height="20"></a>What it costs to keep this loaded
Counted locally with the o200k_base tokenizer, which is exact for GPT models; Claude uses its own tokenizer and its counts differ. Treat this as one consistent yardstick across the catalogue rather than a bill. Prices are per million input tokens.
| Model | Per session | Once invoked |
|---|---|---|
| Fable 5.1 | $0.00087 | $0.01576 |
| Opus 5.5 | $0.00035 | $0.00630 |
| Sonnet 5.5 | $0.00017 | $0.00315 |
| Haiku 4.5 | $0.00009 | $0.00158 |
Grade A, and why
rd-doctor scanned grade A with 0 findings against 26 rules in 11 categories — prompt injection, anti-refusal, data exfiltration, privilege escalation, supply chain, agent snooping, system-prompt leakage, SSRF and excessive agency — measured today.
A static scan of the body, not an audit. Every finding is printed with the line that produced it so you can judge whether it matters here. A mod is markdown that instructs an agent; that is exactly why what it instructs is worth reading.
Nothing flagged
None of the 26 patterns this scan looks for appear in this file: no shell pipes, no recursive deletes, no credential paths, no hidden text, no instruction-override or anti-refusal phrasing, no agent-config snooping. That is not a guarantee, it is the absence of the things that are checkable.
How it starts
The opening of the file, as written. The whole thing — 77 lines — stays where its author put it; the contents beside it link to each section on GitHub.
rd-doctor — the plausibility gate
validate proved the document is well-formed. It proved nothing about whether the model is about the user's system. A schema-clean model can be confident nonsense, and the failure mode of this entire workflow is a beautifully formatted wrong answer. This phase is the gate that stands between the two.
Your output is DOCTOR.md: every line machine-produced evidence, not an opinion. agent/studies/marginal_scientist/DOCTOR.md is the exemplar.
Run it
julia --project=. agent/scripts/rdx.jl diagnose <model> --host=<host.jl> --seed=1 \
--expect-binds=scientist --expect-reusable=scientist --tally=launch
The --expect-* flags come from the brief's pre-registered failure modes — do not invent them here. A check whose expectation was written before the run existed is evidence; one you chose after seeing the output is decoration. If the brief didn't pre-register them, go back and fix the brief, then run.
Exit 0 = clear to report. Exit 1 = at least one failing check; you may not quote a number. Diagnose every arm, not just the baseline — an arm that changes the lever can change which resource binds.
The nine checks
| Check | Severity | Asks |
|---|---|---|
transitions_fire |
fail | did every transition spawn at least once? |
completions_exist |
fail | did anything finish? |
contention_exists |
fail | does anything actually run out? |
intended_resource_binds |
fail | is the scarce thing the one the brief named? |
modality_intent |
fail | are the resources the brief called reusable declared conserved? |
horizon_sufficient |
warn | is anything still in flight at the end; are pools still trending? |
bounded_pools |
warn | is anything growing without limit that isn't a declared tally? |
ledger_wired |
warn | do reward and cost both move? |
stochasticity |
warn | is any outcome actually uncertain? |
contention_exists is the one that matters
If nothing binds, there is no study. A model where every transition always gets what it asks for is an accounting identity with extra steps, and the marginal value it reports is just the accounting cost. When this check fails, do not tune the model until it passes — go back to the user and report the finding: four scientists are enough; the fifth is worth their loaded cost and no more. That is a real, valuable, publishable answer, and manufacturing scarcity to avoid delivering it is the worst thing you can do in this workflow.
What this file has done since we first saw it
Hashed on every crawl. A supply-chain change to an agent config is a question of when, not whether, so the history is kept rather than the latest state alone.
- today First seen · 77 lines · 87 tokens per session scan A 1f873e0e0794
rd-doctor is a skill published in the GitHub repository Merck/ReactiveDynamics.jl (17 stars, last pushed 25d ago), licensed MIT. It adds 87 tokens to every session and 1,576 once invoked, about $0.0003 per session on Opus 5.5. A static security scan graded it A with 0 findings. No closer match exists in the catalogue, so it is treated as the original; first seen 2026-11-07.
rd-doctor compared with skills from other repositories
| Mod | Type | Stars | Last push | Licence | Scan | Tokens | Works with |
|---|---|---|---|---|---|---|---|
| rd-doctorMerck/ReactiveDynamics.jl | Skill | 17 | 25d ago | MIT | A | 87 | Claude Code, Codex |
| pysrastroautomata/PySR | Skill | 4.2k | 4d ago | Apache-2.0 | A | 61 | Claude Code, Codex |
| bestie-featuresJuliaBesties/BestieTemplate.jl | Skill | 130 | 1mo ago | MPL-2.0 | A | 71 | Claude Code, Codex |
| s4h-ethics-bias-checkhuman-avatar/skills-for-humanity | Skill | 239 | 3mo ago | MIT | A | 99 | Claude Code |
| julia-developsamtalki/AgentREPL.jl | Skill | 8 | 5mo ago | Apache-2.0 | A | 17 | Claude Code |
| julia-activatesamtalki/AgentREPL.jl | Skill | 8 | 5mo ago | Apache-2.0 | A | 13 | Claude Code |
| julia-plotsamtalki/AgentREPL.jl | Skill | 8 | 5mo ago | Apache-2.0 | A | 24 | Claude Code |